CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

plastid 3
nucleus 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G523200.2	Wheat	plastid	88.51	89.24
Zm00001d014442_P007	Maize	cytosol, nucleus, plasma membrane, plastid	88.24	89.09
TraesCS7B01G458700.1	Wheat	cytosol, plastid	87.96	88.69
HORVU7Hr1G117780.12	Barley	plastid	87.96	86.54
TraesCS7A01G538600.2	Wheat	cytosol, plastid	88.24	85.54
Os10t0455900-01	Rice	plasma membrane	35.7	82.86
KRG90499	Soybean	extracellular	7.8	78.08
GSMUA_Achr5P17990_001	Banana	mitochondrion	75.1	75.41
VIT_02s0033g00080.t01	Wine grape	mitochondrion	72.23	74.37
KRH76356	Soybean	mitochondrion	73.32	73.73
Solyc12g096050.1.1	Tomato	mitochondrion	72.91	73.62
KRH39650	Soybean	mitochondrion	73.05	73.55
Bra013371.1-P	Field mustard	mitochondrion	72.23	73.54
CDX78916	Canola	mitochondrion	72.23	73.54
AT5G45560.1	Thale cress	mitochondrion	72.23	73.44
CDX99399	Canola	mitochondrion	72.09	73.4
AT4G19040.2	Thale cress	mitochondrion	71.96	72.75
CDY01578	Canola	mitochondrion	71.14	72.63
CDX98603	Canola	mitochondrion	71.27	72.56
Bra017600.1-P	Field mustard	mitochondrion, nucleus	70.72	72.01
CDY13045	Canola	mitochondrion	70.59	71.87
CDY23114	Canola	mitochondrion	70.45	71.73
GSMUA_Achr11P...	Banana	mitochondrion	73.46	70.84
Solyc08g005410.2.1	Tomato	cytosol	67.99	70.1
PGSC0003DMT400047520	Potato	cytosol	67.99	69.61
VIT_02s0033g00120.t01	Wine grape	cytosol	68.95	68.66
VIT_02s0033g00160.t01	Wine grape	cytosol, extracellular	12.86	67.14
VIT_15s0107g00410.t01	Wine grape	cytosol	48.97	64.5
EER89092	Sorghum	nucleus	65.8	64.13
OQU90416	Sorghum	mitochondrion	61.01	61.35
EES06097	Sorghum	cytosol	63.47	58.07
Bra012558.1-P	Field mustard	cytosol	68.95	38.04
OQU76985	Sorghum	cytosol, extracellular, nucleus	14.5	32.62
EER91476	Sorghum	nucleus	32.28	30.85
EES13904	Sorghum	plastid	29.69	28.33
KXG24431	Sorghum	plastid	14.23	26.07

Protein Annotations

Gene3D:2.30.29.30	Gene3D:3.30.530.20	MapMan:35.1	EntrezGene:8086274	UniProt:C5WQL1	InterPro:EDR2_C
EnsemblPlants:EER94411	ProteinID:EER94411	ProteinID:EER94411.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0008289
InterPro:IPR001849	InterPro:IPR002913	InterPro:IPR011993	InterPro:IPR023393	PFAM:PF00169	PFAM:PF01852
PFAM:PF07059	InterPro:PH-like_dom_sf	InterPro:PH_domain	PFscan:PS50003	PFscan:PS50848	PANTHER:PTHR12136
PANTHER:PTHR12136:SF47	SMART:SM00233	SMART:SM00234	EnsemblPlantsGene:SORBI_3001G281100	SUPFAM:SSF50729	SUPFAM:SSF55961
InterPro:START-like_dom_sf	InterPro:START_lipid-bd_dom	unigene:Sbi.8970	UniParc:UPI0001A82DDE	RefSeq:XP_002467413.1	SEG:seg

Description

hypothetical protein

Coordinates

chr1:-:55064589..55072196

Molecular Weight (calculated)

83290.8 Da

IEP (calculated)

7.140

GRAVY (calculated)

-0.508

Length

731 amino acids

Sequence
(BLAST)

001: MMSSSSSSSV VYEGWMVRYG RRKIGRSFVH TRYFVLEPRM LSYYKRKPQH KADKVGGKLP IKSLPIDGNC RVEDRGLKMH HGHMLYVLCV YNKREKHNRI
101: TMAAFNIQEA LIWKEKIEMV IDQRQGVAPS DGNKAFSTSQ QKASLENGRK SSSSDHESQY SHEEEEEEEN QRSLLRRTTI GNGPPESLYD WTRENDLGIS
201: NQGSPDQVFS RGHWRLVRCQ NGLRIFEELQ DVDYLARSCS RAMKAVGVVE ASCEAIFQLV MSMDTTRFEW DCSFQYGSLV EEVDGHTAIL YHRLQLDWFP
301: MFVWPRDLCY VRYWRRNDDG SYVVLFRSRE HQNCGPQPGF VRAHIESGGF NISPLKSRNG RIRTQVQHLM QIDLKGWGVG YVPSFQQHCL LHMLNSVAGL
401: REWFSQSDES QVLPRIPVMV NMTQSVSSKK GRKAQESTTQ TSIQMDPSRH STALEEESDE DDEFLIPESE PEPSTREDAA DIRQSGRNED DSDQIDLSGF
501: SGNLRRDDRD NSRDCWRISD GNNFRVRSKN FVYDKSKVPA GKPLMELVAV DWFKDAKRMD HVARRKGCAV QVAAEKGLFA LAINLQVPGT TNYSMVFYFV
601: TKKLIPNSLL QRFVDGDDEY RNSRFKLIPS VPKGSWIVRQ SVGSTPCLLG KAVDITYIRG SNYLEIDVDI GSSTVANGVL GLVCGVITTL VVDMAFLVQA
701: NTYEELPERL IGAVRMSHIE LSSAIVPVLE D

Best Arabidopsis Sequence Match ( AT4G19040.2 )
(BLAST)

001: MSKVVYEGWM VRYGRRKIGR SYIHMRYFVL EPRLLAYYKK KPQDYQVPIK TMLIDGNCRV EDRGLKTHHG HMVYVLSVYN KKEKSHRITM AAFNIQEALM
101: WKEKIESVID QHQESQVPNG QQYVSFEYKS GMDTGRTASS SDHESQFSAA EDEEDSRRSL MRRTTIGNGP PESVLDWTKE FDAELANQNS DNQAFSRKHW
201: RLLQCQNGLR IFEELLEVDY LPRSCSRAMK AVGVVEATCE EIFELLMSMD GTRYEWDCSF QFGSLVEEVD GHTAVLYHRL LLDWFPMIVW PRDLCYVRYW
301: RRNDDGSYVV LFRSREHENC GPQPGCVRAH LESGGYNISP LKPRNGRPRT QVQHLIQIDL KGWGAGYLPA FQQHCLLQML NSVAGLREWF SQTDERGVHT
401: RIPVMVNMAS SSLSLTKSGK SLHKSAFSLD QTNSVNRNSL LMDEDSDDDD EFQIAESEQE PETSKPETDV KRPGVHPIKE EPAHNIDLSC FSGNLKRNEN
501: ENARNCWRIS DGNNFKVRGK NFGQEKRKIP AGKHLMDLVA VDWFKDSKRI DHVARRKGCA AQVAAEKGLF SMVVNVQVPG STHYSMVFYF VMKELVPGSL
601: LQRFVDGDDE FRNSRLKLIP LVPKGSWIVR QSVGSTPCLL GKAVDCNYIR GPTYLEIDVD IGSSTVANGV LGLVIGVITS LVVEMAFLVQ ANTAEEQPER
701: LIGAVRVSHI ELSSAIVPNL ESE

Arabidopsis Description

EDR2ENHANCED DISEASE RESISTANCE 2 [Source:TAIR;Acc:AT4G19040]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.