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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 3
  • plastid 2
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d035973_P005 Maize nucleus, plastid 92.4 92.65
TraesCS4A01G437200.1 Wheat plastid 81.73 80.45
TraesCS7D01G045000.1 Wheat cytosol, nucleus, plastid 81.2 79.61
TraesCS7A01G050100.1 Wheat nucleus 80.67 79.5
Os06t0116500-01 Rice plastid 38.4 78.69
HORVU7Hr1G008800.4 Barley plastid 81.73 73.33
OQU90416 Sorghum mitochondrion 71.07 73.31
EES06097 Sorghum cytosol 76.13 71.46
EER94411 Sorghum cytosol, nucleus, plastid 64.13 65.8
EER91476 Sorghum nucleus 32.0 31.37
OQU76985 Sorghum cytosol, extracellular, nucleus 13.07 30.15
EES13904 Sorghum plastid 28.27 27.68
KXG24431 Sorghum plastid 14.4 27.07
Protein Annotations
Gene3D:2.30.29.30Gene3D:3.30.530.20MapMan:35.1UniProt:C5Z2V4InterPro:EDR2_CEnsemblPlants:EER89092
ProteinID:EER89092ProteinID:EER89092.2GO:GO:0003674GO:GO:0005488GO:GO:0008289InterPro:IPR001849
InterPro:IPR002913InterPro:IPR011993InterPro:IPR023393PFAM:PF01852PFAM:PF07059InterPro:PH-like_dom_sf
InterPro:PH_domainPFscan:PS50003PFscan:PS50848PANTHER:PTHR12136PANTHER:PTHR12136:SF63SMART:SM00233
SMART:SM00234EnsemblPlantsGene:SORBI_3010G013800SUPFAM:SSF50729SUPFAM:SSF55961InterPro:START-like_dom_sfInterPro:START_lipid-bd_dom
UniParc:UPI0007F23682SEG:seg::::
Description
hypothetical protein
Coordinates
chr10:+:1148990..1156874
Molecular Weight (calculated)
84750.4 Da
IEP (calculated)
6.191
GRAVY (calculated)
-0.476
Length
750 amino acids
Sequence
(BLAST)
001: MLSSSASKRD AARSGGELPR PHTSGMARSE ELPKGGCAGP TPAAVRHEGW MVRHGRRKIG RSFFHTRYFV LDNRVLAYYK KQPRDSMIPL KSIVIDGNCR
101: VEDRGLKTHH GQMIYLLCIY NKKEKENQIT MGGYNIQDTL AWKRKIELLI DQQQDTTTAK HRKAFASLDF DIDLGGPFSF SDHDSGPEDE DDEEEEPRPT
201: LLRRTTIGNG PPDSVLDWTK EADIALSDQN DMSQAYSRKN WRLLRCQNGL RIFEELVEVE YLARSCSRAM RAVGVVEASC EAIFGLVMSM DVTRYEWDCS
301: FQYGSLVEEV DGHTAILYHR LQLNWCSMLV WPRDLCYLRY WRRNDDGSYV VLFRSTEHQN CGPQPGFVRA SIESGGFKIS PLKSLNGRPR TQVQHLMQID
401: VRGWGVNYLP SFQYHSLLQM LNCVAGLREY FSQTDEVHTV PRIPVMHTMF NAVSMKKDQN LQEPDSKTKQ TDSKHLDMVD EESEDDDDYQ APEADLEEEP
501: TKSDSDAKSS DPIDLSWFSG TIRQDTNEKS RNCWAVPDSK IFKVRSKTFP HDKSKVPAGK YLMELVAIDW FKDTKRMDHV ARRKGSAAQV AADKGMFTFL
601: VNIQIPGPSH YSLVLYFVSN SLEKGSLLQR FADGDDDFRN SRLKLIPSVP KGSWIVRQSV GSTPCLLGKA VDCSYLRGPD YLEVDVDIGS SAVANGVLGL
701: VFGVVTTLVV DMAFLIQANT YDELPEQLLG AARLSHIEPS AAVCPDLENI
Best Arabidopsis Sequence Match ( AT4G19040.1 )
(BLAST)
001: MSKVVYEGWM VRYGRRKIGR SYIHMRYFVL EPRLLAYYKK KPQDYQVPIK TMLIDGNCRV EDRGLKTHHG HMVYVLSVYN KKEKSHRITM AAFNIQEALM
101: WKEKIESVID QHQESQVPNG QQYVSFEYKS GMDTGRTASS SDHESQFSAA EDEEDSRRSL MRRTTIGNGP PESVLDWTKE FDAELANQNS DNQAFSRKHW
201: RLLQCQNGLR IFEELLEVDY LPRSCSRAMK AVGVVEATCE EIFELLMSMD GTRYEWDCSF QFGSLVEEVD GHTAVLYHRL LLDWFPMIVW PRDLCYVRYW
301: RRNDDGSYVV LFRSREHENC GPQPGCVRAH LESGGYNISP LKPRNGRPRT QVQHLIQIDL KGWGAGYLPA FQQHCLLQML NSVAGLREWF SQTDERGVHT
401: RIPVMVNMAS SSLSLTKSGK SLHKSAFSLD QTNSVNRNSL LMDEDSDDDD EFQIAESEQE PETSKPETDV KRPEEEPAHN IDLSCFSGNL KRNENENARN
501: CWRISDGNNF KVRGKNFGQE KRKIPAGKHL MDLVAVDWFK DSKRIDHVAR RKGCAAQVAA EKGLFSMVVN VQVPGSTHYS MVFYFVMKEL VPGSLLQRFV
601: DGDDEFRNSR LKLIPLVPKG SWIVRQSVGS TPCLLGKAVD CNYIRGPTYL EIDVDIGSST VANGVLGLVI GVITSLVVEM AFLVQANTAE EQPERLIGAV
701: RVSHIELSSA IVPNLESE
Arabidopsis Description
EDR2ENHANCED DISEASE RESISTANCE 2 [Source:TAIR;Acc:AT4G19040]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.