CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G299000.1	Wheat	cytosol	60.9	78.64
TraesCS7A01G303600.1	Wheat	cytosol	60.9	78.64
TraesCS7B01G203900.1	Wheat	cytosol	60.65	78.32
Zm00001d024605_P001	Maize	mitochondrion	83.96	77.19
HORVU7Hr1G072050.4	Barley	cytosol	60.15	75.95
TraesCS2A01G242800.1	Wheat	cytosol	58.15	75.08
Os08t0152600-01	Rice	cytosol	62.16	68.7
AT1G06050.1	Thale cress	cytosol	49.37	62.94
Bra015470.1-P	Field mustard	cytosol	47.87	62.01
KRH24608	Soybean	cytosol	46.87	60.32
KRH23216	Soybean	cytosol	33.33	60.18
PGSC0003DMT400042135	Potato	cytosol	46.87	59.18
VIT_05s0102g00770.t01	Wine grape	cytosol	52.38	58.06
KRH10121	Soybean	endoplasmic reticulum, golgi	49.37	56.13
GSMUA_Achr1P11490_001	Banana	plastid	55.64	55.64
Solyc06g053360.2.1	Tomato	cytosol	41.6	54.43
KRH29613	Soybean	cytosol	40.1	54.05
OQU76985	Sorghum	cytosol, extracellular, nucleus	28.07	34.46
CDY10168	Canola	nucleus	48.12	34.04
EER89092	Sorghum	nucleus	27.07	14.4
OQU90416	Sorghum	mitochondrion	26.07	14.31
EER94411	Sorghum	cytosol, nucleus, plastid	26.07	14.23
EES13904	Sorghum	plastid	26.57	13.84
EES06097	Sorghum	cytosol	24.81	12.39
EER91476	Sorghum	nucleus	23.31	12.16

Protein Annotations

EnsemblPlants:KXG24431	EnsemblPlantsGene:SORBI_3007G041400	InterPro:EDR2_C	PANTHER:PTHR12136	PANTHER:PTHR12136:SF61	PFAM:PF07059
ProteinID:KXG24431	ProteinID:KXG24431.1	SEG:seg	UniParc:UPI00081ABB5C	UniProt:A0A1B6PFG8	MapMan:35.1

Description

hypothetical protein

Coordinates

chr7:-:4065480..4069235

Molecular Weight (calculated)

43407.2 Da

IEP (calculated)

5.480

GRAVY (calculated)

-0.274

Length

399 amino acids

Sequence
(BLAST)

001: MLDRDAGVAV VTSSAPACIA VAATATQGQS SPSPSFLPSP AGNQTSDAIH NPEASSDRVI AALRLGDLVR SYCHFIPRRV VVSRQDSGSP KMSSSNGEAE
101: QQWIESVKLG GAVPCLTPEN CPNGWATPSG DSFMVRGPEY LTNKVKIPGG EYLLKPLGFD WIKGPAKICE ILKDNNHRVR KAIDEEVSRG NQPFVWAFNL
201: QLPKDNYSAI FYFVSLEAIP EGSLMDQFLK GDDAFRNSRL KLIANIVKGP WIVRTAVGEQ AICILGRALS CKYTQGSNFI EVDVDIGSSI VANAIVHLAF
301: GYITTLTVDL AFLIESQNES ELPERLLGAV RFSELNPGSA GLFEKRSEEH QESTQSRPVG FWQGFSQLLN NQGNPREPSP TLQNTNGSLH KEEANENSK

Best Arabidopsis Sequence Match ( AT1G06050.1 )
(BLAST)

001: MAGSVGEETE PEWIKRVKLE GAVPCLKPDD NCKNGWTTPS PDTFMVRGPK YFSDKVKIPA GDFLLKPLGF DWIKGPKKLS EILSYPSSRI RKVIDEEFQK
101: DGTKPFVWAF NLQLPHKDNY SAVAYFVTTE PILEGSLMDR FLKGDDGFKK SRLKLIANIV KGPWIVRKAV GEQAICVIGR ALSCKYVSGE NFVEIDVDIG
201: SSMVASAIVH LAFGYVTTLT VDLAFLIESQ TEAELPEKLL GAVRFSELQT ESATSIELSS STSNDQWDQT TSERSSWWKS IGNGFSNLLN QDTANMNNTS
301: HGDIQKDEHV QKQ

Arabidopsis Description

Protein of unknown function (DUF1336) [Source:TAIR;Acc:AT1G06050]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.