CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytoskeleton, cytosol, mitochondrion
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH10121	Soybean	endoplasmic reticulum, golgi	92.76	58.4
KRH24608	Soybean	cytosol	74.66	53.23
KRH29613	Soybean	cytosol	70.14	52.36
AT1G06050.1	Thale cress	cytosol	61.99	43.77
TraesCS7D01G299000.1	Wheat	cytosol	60.63	43.37
TraesCS7B01G203900.1	Wheat	cytosol	60.63	43.37
VIT_05s0102g00770.t01	Wine grape	cytosol	70.14	43.06
TraesCS7A01G303600.1	Wheat	cytosol	60.18	43.04
HORVU7Hr1G072050.4	Barley	cytosol	61.54	43.04
TraesCS2A01G242800.1	Wheat	cytosol	59.73	42.72
Bra015470.1-P	Field mustard	cytosol	57.47	41.23
Solyc06g053360.2.1	Tomato	cytosol	55.66	40.33
PGSC0003DMT400042135	Potato	cytosol	55.66	38.92
Os08t0152600-01	Rice	cytosol	60.18	36.84
GSMUA_Achr1P11490_001	Banana	plastid	61.99	34.34
KRG90499	Soybean	extracellular	11.31	34.25
KXG24431	Sorghum	plastid	60.18	33.33
Zm00001d024605_P001	Maize	mitochondrion	59.28	30.18
KRH15692	Soybean	cytosol	36.65	27.18
KRH52302	Soybean	cytosol	33.94	25.95
KRH61636	Soybean	cytosol	33.03	24.58
KRH05337	Soybean	cytosol	28.51	23.25
CDY10168	Canola	nucleus	57.92	22.7
KRH12970	Soybean	cytosol	33.03	9.97
KRH20109	Soybean	cytosol, nucleus	32.13	9.5
KRH03545	Soybean	nucleus	31.67	9.42
KRH76356	Soybean	mitochondrion	30.32	9.22
KRH39650	Soybean	mitochondrion	29.86	9.09
KRH08525	Soybean	cytosol	28.51	8.73
KRH22877	Soybean	plastid	27.6	8.27
KRH26439	Soybean	cytosol, extracellular, nucleus, plastid	26.7	8.02
KRH34863	Soybean	cytosol, mitochondrion, nucleus, plastid	25.79	7.91

Protein Annotations

EMBL:ACUP02008458	EnsemblPlants:KRH23216	EnsemblPlantsGene:GLYMA_13G344900	InterPro:EDR2_C	PFAM:PF07059	ProteinID:KRH23216
ProteinID:KRH23216.1	UniParc:UPI0006ED5F84	UniProt:A0A0R0GY68	MapMan:35.1	:	:

Description

hypothetical protein

Coordinates

chr13:-:43570241..43571499

Molecular Weight (calculated)

24377.8 Da

IEP (calculated)

4.699

GRAVY (calculated)

-0.151

Length

221 amino acids

Sequence
(BLAST)

001: MGQVRKVIDN EFPAGDKPFV WAFNLQLPTK DNYSAIAYFT TKETVLEDLL MDKFLKGGNA FRNSRLKLIA NIVKGPWIVR KAVGEQAICK LGENFIEVDI
101: DIGSSMVASA IVHLAFGYIS TLTVDLAFLI ESQAESELPE KIFGAFRFSE LDPASARTIE PSDVVSCDNA QTSLPTRLWK SIGQGFSHIL HSGPQEDGST
201: SGSEHTNDVD HKDNPIDITN W

Best Arabidopsis Sequence Match ( AT1G06050.1 )
(BLAST)

001: MAGSVGEETE PEWIKRVKLE GAVPCLKPDD NCKNGWTTPS PDTFMVRGPK YFSDKVKIPA GDFLLKPLGF DWIKGPKKLS EILSYPSSRI RKVIDEEFQK
101: DGTKPFVWAF NLQLPHKDNY SAVAYFVTTE PILEGSLMDR FLKGDDGFKK SRLKLIANIV KGPWIVRKAV GEQAICVIGR ALSCKYVSGE NFVEIDVDIG
201: SSMVASAIVH LAFGYVTTLT VDLAFLIESQ TEAELPEKLL GAVRFSELQT ESATSIELSS STSNDQWDQT TSERSSWWKS IGNGFSNLLN QDTANMNNTS
301: HGDIQKDEHV QKQ

Arabidopsis Description

Protein of unknown function (DUF1336) [Source:TAIR;Acc:AT1G06050]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.