Factsheet for Zm00001d024605_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG24431	Sorghum	plastid	77.19	83.96
TraesCS7D01G299000.1	Wheat	cytosol	55.07	77.35
TraesCS7B01G203900.1	Wheat	cytosol	55.07	77.35
TraesCS7A01G303600.1	Wheat	cytosol	54.61	76.7
HORVU7Hr1G072050.4	Barley	cytosol	54.38	74.68
TraesCS2A01G242800.1	Wheat	cytosol	52.53	73.79
Os08t0152600-01	Rice	cytosol	55.3	66.48
AT1G06050.1	Thale cress	cytosol	44.24	61.34
KRH24608	Soybean	cytosol	43.78	61.29
Bra015470.1-P	Field mustard	cytosol	43.32	61.04
PGSC0003DMT400042135	Potato	cytosol	43.32	59.49
KRH23216	Soybean	cytosol	30.18	59.28
VIT_05s0102g00770.t01	Wine grape	cytosol	47.0	56.67
GSMUA_Achr1P11490_001	Banana	plastid	51.84	56.39
KRH10121	Soybean	endoplasmic reticulum, golgi	45.39	56.13
Solyc06g053360.2.1	Tomato	cytosol	38.25	54.43
KRH29613	Soybean	cytosol	36.41	53.38
Zm00001d014641_P001	Maize	cytosol, extracellular, nucleus	26.04	34.77
Zm00001d036506_P001	Maize	extracellular, nucleus, plastid	25.58	33.95
CDY10168	Canola	nucleus	43.55	33.51
Zm00001d019662_P001	Maize	mitochondrion	11.06	26.82
Zm00001d032166_P003	Maize	endoplasmic reticulum, plasma membrane	21.66	25.34
Zm00001d035973_P005	Maize	nucleus, plastid	25.12	14.57
Zm00001d014442_P007	Maize	cytosol, nucleus, plasma membrane, plastid	24.19	14.5
Zm00001d007093_P006	Maize	nucleus	24.88	13.55
Zm00001d054090_P008	Maize	cytosol, plastid	24.42	13.27
Zm00001d014928_P002	Maize	cytosol, mitochondrion	23.96	13.02
Zm00001d032685_P001	Maize	nucleus	20.28	11.47

Protein Annotations

EnsemblPlants:Zm00001d024605_P001	EnsemblPlants:Zm00001d024605_T001	EnsemblPlantsGene:Zm00001d024605	InterPro:EDR2_C	PANTHER:PTHR12136	PANTHER:PTHR12136:SF61
PFAM:PF07059	ProteinID:AQK41568.1	UniParc:UPI000221578F	UniProt:A0A1Q0XNL8	MapMan:35.1	:

Description

Lipid binding protein

Coordinates

chr10:+:80137465..80140638

Molecular Weight (calculated)

48067.2 Da

IEP (calculated)

8.791

GRAVY (calculated)

-0.379

Length

434 amino acids

Sequence
(BLAST)

001: MLHRDGGSTS SRHQRLPPFV YPSQVAATAT QKLPFLPWNG NETWELGRAS SRNLLSFPSQ DAIQNPTRSR RSQGPLHILP PPSARFPDRA IAGARLGDLV
101: GSRPVLPLRR RCVAVTRQSG LRIPKMASSN GEAEQQWIEN IKSGGTVPCL APENCPNGWA TPPGDSFMVR GPEYLTNKVK IPGGEYLLKP LGFDWIKGPA
201: KICEILKDSN HRVRKAIDDE VSRSNQPFVW AFNLQLPKDN FSAIFYFVSL EAIPEGSLMD QFLKGDDAFR NSRLKLIANI VKGPWIVRTA VGEQAICILG
301: RALSCKYVQG SNFIEVDVDI GSSIVANAIV HLAFGYITTL TVDLAFLIES QTEPELPERL IGAVRFSELN PGSAGLFERR SEEHQESTQS RPVGFWQGFS
401: QLLNNQGNTR EPSPNLQNTN GTLRKEEANE DAKW

Best Arabidopsis Sequence Match ( AT1G06050.1 )
(BLAST)

001: MAGSVGEETE PEWIKRVKLE GAVPCLKPDD NCKNGWTTPS PDTFMVRGPK YFSDKVKIPA GDFLLKPLGF DWIKGPKKLS EILSYPSSRI RKVIDEEFQK
101: DGTKPFVWAF NLQLPHKDNY SAVAYFVTTE PILEGSLMDR FLKGDDGFKK SRLKLIANIV KGPWIVRKAV GEQAICVIGR ALSCKYVSGE NFVEIDVDIG
201: SSMVASAIVH LAFGYVTTLT VDLAFLIESQ TEAELPEKLL GAVRFSELQT ESATSIELSS STSNDQWDQT TSERSSWWKS IGNGFSNLLN QDTANMNNTS
301: HGDIQKDEHV QKQ

Arabidopsis Description

Protein of unknown function (DUF1336) [Source:TAIR;Acc:AT1G06050]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.