Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G299000.1 | Wheat | cytosol | 94.3 | 96.44 |
| TraesCS7B01G203900.1 | Wheat | cytosol | 93.99 | 96.12 |
| TraesCS7A01G303600.1 | Wheat | cytosol | 93.67 | 95.79 |
| TraesCS2A01G242800.1 | Wheat | cytosol | 91.77 | 93.85 |
| Os08t0152600-01 | Rice | cytosol | 78.48 | 68.7 |
| PGSC0003DMT400042135 | Potato | cytosol | 61.71 | 61.71 |
| KRH24608 | Soybean | cytosol | 60.44 | 61.61 |
| KRH23216 | Soybean | cytosol | 43.04 | 61.54 |
| AT1G06050.1 | Thale cress | cytosol | 60.13 | 60.7 |
| KXG24431 | Sorghum | plastid | 75.95 | 60.15 |
| Bra015470.1-P | Field mustard | cytosol | 57.91 | 59.42 |
| VIT_05s0102g00770.t01 | Wine grape | cytosol | 64.56 | 56.67 |
| Solyc06g053360.2.1 | Tomato | cytosol | 54.43 | 56.39 |
| KRH10121 | Soybean | endoplasmic reticulum, golgi | 62.34 | 56.13 |
| KRH29613 | Soybean | cytosol | 50.95 | 54.39 |
| Zm00001d024605_P001 | Maize | mitochondrion | 74.68 | 54.38 |
| GSMUA_Achr1P11490_001 | Banana | plastid | 64.24 | 50.88 |
| CDY10168 | Canola | nucleus | 58.54 | 32.8 |
| HORVU7Hr1G098100.1 | Barley | plastid | 35.44 | 31.64 |
| HORVU5Hr1G053070.9 | Barley | cytosol, nucleus | 32.59 | 13.59 |
| HORVU7Hr1G117780.12 | Barley | plastid | 31.33 | 13.32 |
| HORVU6Hr1G002050.2 | Barley | plastid | 29.75 | 11.82 |
| HORVU7Hr1G008800.4 | Barley | plastid | 30.38 | 11.48 |
| HORVU1Hr1G041740.29 | Barley | extracellular, nucleus, plasma membrane | 25.63 | 10.44 |
Protein Annotations
| EMBL:AK353796 | EnsemblPlants:HORVU7Hr1G072050.4 | EnsemblPlantsGene:HORVU7Hr1G072050 | InterPro:EDR2_C | PANTHER:PTHR12136 | PANTHER:PTHR12136:SF61 |
| PFAM:PF07059 | SEG:seg | UniParc:UPI000B48818D | UniProt:A0A287WUS6 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chrchr7H:-:400829860..400830975
Molecular Weight (calculated)
34663.4 Da
IEP (calculated)
5.728
GRAVY (calculated)
-0.171
Length
316 amino acids
Sequence
(BLAST)
(BLAST)
001: MACSDGEAKH QWIQNVQSGG AVPCLPPENC PNGWATPPGD TFMVRGPEYF ATKAKIPGGE YLLKPLGVDW IKGSVKICEV LKNRNHRVRK AIDEEVLHGS
101: KPFVWAFNLQ LPSKENYSAI FYFVSLEPVP EGSLMDQFLK GDDALRKSRL KLIANIVKGP WIVRKAVGEQ AICILGRALS CKYVQGSNFI EVDVDIGSSI
201: VANAIVHLAF GYVATLTVDL AFVIESQAES ELPERLLGAV RFSELSPGSA GVYEVPSEEQ QEVAPILPSR LWRSFSQLLQ NPGSSMEPSP SSENTNGNFH
301: KEDAGNNDNC FITRKV
101: KPFVWAFNLQ LPSKENYSAI FYFVSLEPVP EGSLMDQFLK GDDALRKSRL KLIANIVKGP WIVRKAVGEQ AICILGRALS CKYVQGSNFI EVDVDIGSSI
201: VANAIVHLAF GYVATLTVDL AFVIESQAES ELPERLLGAV RFSELSPGSA GVYEVPSEEQ QEVAPILPSR LWRSFSQLLQ NPGSSMEPSP SSENTNGNFH
301: KEDAGNNDNC FITRKV
001: MAGSVGEETE PEWIKRVKLE GAVPCLKPDD NCKNGWTTPS PDTFMVRGPK YFSDKVKIPA GDFLLKPLGF DWIKGPKKLS EILSYPSSRI RKVIDEEFQK
101: DGTKPFVWAF NLQLPHKDNY SAVAYFVTTE PILEGSLMDR FLKGDDGFKK SRLKLIANIV KGPWIVRKAV GEQAICVIGR ALSCKYVSGE NFVEIDVDIG
201: SSMVASAIVH LAFGYVTTLT VDLAFLIESQ TEAELPEKLL GAVRFSELQT ESATSIELSS STSNDQWDQT TSERSSWWKS IGNGFSNLLN QDTANMNNTS
301: HGDIQKDEHV QKQ
101: DGTKPFVWAF NLQLPHKDNY SAVAYFVTTE PILEGSLMDR FLKGDDGFKK SRLKLIANIV KGPWIVRKAV GEQAICVIGR ALSCKYVSGE NFVEIDVDIG
201: SSMVASAIVH LAFGYVTTLT VDLAFLIESQ TEAELPEKLL GAVRFSELQT ESATSIELSS STSNDQWDQT TSERSSWWKS IGNGFSNLLN QDTANMNNTS
301: HGDIQKDEHV QKQ
Arabidopsis Description
Protein of unknown function (DUF1336) [Source:TAIR;Acc:AT1G06050]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.