Factsheet for TraesCS2A01G242800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G299000.1	Wheat	cytosol	96.12	96.12
TraesCS7B01G203900.1	Wheat	cytosol	95.79	95.79
TraesCS7A01G303600.1	Wheat	cytosol	95.47	95.47
HORVU7Hr1G072050.4	Barley	cytosol	93.85	91.77
Os08t0152600-01	Rice	cytosol	76.05	65.1
KRH23216	Soybean	cytosol	42.72	59.73
PGSC0003DMT400042135	Potato	cytosol	60.52	59.18
KRH24608	Soybean	cytosol	59.22	59.03
AT1G06050.1	Thale cress	cytosol	59.22	58.47
KXG24431	Sorghum	plastid	75.08	58.15
Bra015470.1-P	Field mustard	cytosol	57.93	58.12
VIT_05s0102g00770.t01	Wine grape	cytosol	63.11	54.17
Solyc06g053360.2.1	Tomato	cytosol	53.4	54.1
KRH10121	Soybean	endoplasmic reticulum, golgi	61.16	53.85
KRH29613	Soybean	cytosol	50.49	52.7
Zm00001d024605_P001	Maize	mitochondrion	73.79	52.53
GSMUA_Achr1P11490_001	Banana	plastid	63.11	48.87
TraesCS7A01G424300.1	Wheat	cytosol	34.95	33.75
CDY10168	Canola	nucleus	58.25	31.91
TraesCS5A01G173000.1	Wheat	cytosol	32.04	13.08
TraesCS7A01G538600.2	Wheat	cytosol, plastid	31.07	12.73
TraesCS7A01G050100.1	Wheat	nucleus	29.77	12.09
TraesCS4A01G437200.1	Wheat	plastid	29.77	12.07
TraesCS6A01G005000.1	Wheat	nucleus	29.13	11.81
TraesCS1A01G156500.1	Wheat	nucleus	26.21	10.67

Protein Annotations

EnsemblPlants:TraesCS2A01G242800.1	EnsemblPlantsGene:TraesCS2A01G242800	InterPro:EDR2_C	PANTHER:PTHR12136	PANTHER:PTHR12136:SF61	PFAM:PF07059
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr2A:+:338279491..338280635

Molecular Weight (calculated)

33864.4 Da

IEP (calculated)

5.974

GRAVY (calculated)

-0.214

Length

309 amino acids

Sequence
(BLAST)

001: MACSDGGAEH QWIQNVQSGG AVPCLPPENC PSGWATPPGH TFMVTGPEYF ATKAKIPGGE YLLKPLVVDW IKGPVKICEV LKKRNHRVRK AIDEQVSHGN
101: KPFVWAFNLQ LPSKENYSAI FYFVSLEPAP EGSLMDQFLK GDDALRKSRL KLIANIVKGP WIVRKAVGEQ AICILGRALS CKYVEGSNFN EVDVDIGSSI
201: VANAIVHLAF GYVATLTIDL AFVIESQAES ELPERLLGAI RFSELSPGSA GVYEVPSEEQ QEIAPILPSR LWRSFSQLLQ NPGSSMQPSP SSENTNRNFH
301: KEDAGNNDN

Best Arabidopsis Sequence Match ( AT1G06050.1 )
(BLAST)

001: MAGSVGEETE PEWIKRVKLE GAVPCLKPDD NCKNGWTTPS PDTFMVRGPK YFSDKVKIPA GDFLLKPLGF DWIKGPKKLS EILSYPSSRI RKVIDEEFQK
101: DGTKPFVWAF NLQLPHKDNY SAVAYFVTTE PILEGSLMDR FLKGDDGFKK SRLKLIANIV KGPWIVRKAV GEQAICVIGR ALSCKYVSGE NFVEIDVDIG
201: SSMVASAIVH LAFGYVTTLT VDLAFLIESQ TEAELPEKLL GAVRFSELQT ESATSIELSS STSNDQWDQT TSERSSWWKS IGNGFSNLLN QDTANMNNTS
301: HGDIQKDEHV QKQ

Arabidopsis Description

Protein of unknown function (DUF1336) [Source:TAIR;Acc:AT1G06050]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.