Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 3
- nucleus 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G010400.2 | Wheat | plastid | 98.69 | 93.65 |
| HORVU6Hr1G002050.2 | Barley | plastid | 91.73 | 87.92 |
| TraesCS6D01G007600.1 | Wheat | nucleus | 98.16 | 85.1 |
| OQU90416 | Sorghum | mitochondrion | 77.95 | 81.71 |
| Os02t0102800-01 | Rice | plasma membrane | 84.51 | 80.1 |
| EES06097 | Sorghum | cytosol | 82.68 | 78.85 |
| Zm00001d054090_P008 | Maize | cytosol, plastid | 81.89 | 78.1 |
| Zm00001d007093_P006 | Maize | nucleus | 80.45 | 76.91 |
| Zm00001d014928_P002 | Maize | cytosol, mitochondrion | 80.31 | 76.6 |
| Os09t0107600-00 | Rice | extracellular | 8.27 | 70.79 |
| TraesCS4A01G437200.1 | Wheat | plastid | 70.47 | 70.47 |
| TraesCS7A01G050100.1 | Wheat | nucleus | 69.55 | 69.65 |
| TraesCS7A01G538600.2 | Wheat | cytosol, plastid | 59.45 | 60.08 |
| TraesCS7A01G424300.1 | Wheat | cytosol | 12.6 | 30.0 |
| TraesCS7A01G303600.1 | Wheat | cytosol | 12.07 | 29.77 |
| TraesCS1A01G156500.1 | Wheat | nucleus | 29.4 | 29.51 |
| TraesCS2A01G242800.1 | Wheat | cytosol | 11.81 | 29.13 |
| TraesCS5A01G173000.1 | Wheat | cytosol | 25.85 | 26.02 |
Protein Annotations
| Gene3D:2.30.29.30 | Gene3D:3.30.530.20 | MapMan:35.1 | ncoils:Coil | InterPro:EDR2_C | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0008289 | InterPro:IPR001849 | InterPro:IPR002913 | InterPro:IPR011993 | InterPro:IPR023393 |
| PFAM:PF01852 | PFAM:PF07059 | InterPro:PH-like_dom_sf | InterPro:PH_domain | PFscan:PS50003 | PFscan:PS50848 |
| PANTHER:PTHR12136 | PANTHER:PTHR12136:SF64 | SMART:SM00233 | SMART:SM00234 | SUPFAM:SSF50729 | SUPFAM:SSF55961 |
| InterPro:START-like_dom_sf | InterPro:START_lipid-bd_dom | EnsemblPlantsGene:TraesCS6A01G005000 | EnsemblPlants:TraesCS6A01G005000.1 | TIGR:cd00177 | TIGR:cd00821 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr6A:+:1942938..1948545
Molecular Weight (calculated)
86326.0 Da
IEP (calculated)
6.162
GRAVY (calculated)
-0.548
Length
762 amino acids
Sequence
(BLAST)
(BLAST)
001: MQAKTSALAA AREAAAAAIH HEGWMVRYGR RKIGRSFFHT RYFVLESKLL AYYKKKPKDS MVPLKSLLID GNCRVEDRGL KTHHGQMIYV LCVYNKKEKE
101: HQITMGAYDI EDALAWKKKI EQIIDQQQDS MADKNRKAFA SMDFDTELGG QFAFSDHDSA AEEEEERPIL TRRTTIGNGP PESIRDWTNE PDIGSNQNEP
201: SQFSSKKNWR LLRCQNGLRI FEELLEVDYL ARSCSRAMRA VGVVEATCEA IFGLVMSMDV TRYEWDCSFR YGSLVEEVDG HTAIIYHKLQ LHWCPMLVWP
301: RDLCYVRYWR RNDDGSYVVL FRSVDHPNCG RQRGYVRAFI ESGGFKITPL KCRNGRPRTQ VQHLMQIDLK GWLLNYSASF QYHTLLQIQN CVAGLREYFS
401: QTDECHIAPR IPVMEKMFDP SADQKNPQPR AIDKIKPLDK DQKDGRNMSI IEEESDEDDD YQVPEANIED DSNKSDNDAK PEEPLEKIDL SCFSGVLHRD
501: PDEKTRNCWT VPDSTLFKVR SKNFPTDKSK IPAASYLMEL AAIDWFKDTK RMDNVGRQKG CVAQLAAEKG MHTFVANIQI PGSTHYSIVM YFVTNTMKKG
601: SLLQRFFDGD DEFRNSRLKL IPAVPKGSWI VRQSVGSTPC LLGKAVDCSY IRAPGYLEVD VDIGSSAVAN GVLGLVFGVV TTLVVDMAFL IQANTYEELP
701: EQVIGAARLA HVEPAAAIVP DLDNTNSDSK DSNNDDNSNN NNSSSNNNNA TSSEDDSSKK TN
101: HQITMGAYDI EDALAWKKKI EQIIDQQQDS MADKNRKAFA SMDFDTELGG QFAFSDHDSA AEEEEERPIL TRRTTIGNGP PESIRDWTNE PDIGSNQNEP
201: SQFSSKKNWR LLRCQNGLRI FEELLEVDYL ARSCSRAMRA VGVVEATCEA IFGLVMSMDV TRYEWDCSFR YGSLVEEVDG HTAIIYHKLQ LHWCPMLVWP
301: RDLCYVRYWR RNDDGSYVVL FRSVDHPNCG RQRGYVRAFI ESGGFKITPL KCRNGRPRTQ VQHLMQIDLK GWLLNYSASF QYHTLLQIQN CVAGLREYFS
401: QTDECHIAPR IPVMEKMFDP SADQKNPQPR AIDKIKPLDK DQKDGRNMSI IEEESDEDDD YQVPEANIED DSNKSDNDAK PEEPLEKIDL SCFSGVLHRD
501: PDEKTRNCWT VPDSTLFKVR SKNFPTDKSK IPAASYLMEL AAIDWFKDTK RMDNVGRQKG CVAQLAAEKG MHTFVANIQI PGSTHYSIVM YFVTNTMKKG
601: SLLQRFFDGD DEFRNSRLKL IPAVPKGSWI VRQSVGSTPC LLGKAVDCSY IRAPGYLEVD VDIGSSAVAN GVLGLVFGVV TTLVVDMAFL IQANTYEELP
701: EQVIGAARLA HVEPAAAIVP DLDNTNSDSK DSNNDDNSNN NNSSSNNNNA TSSEDDSSKK TN
001: MSKVVYEGWM VRYGRRKIGR SYIHMRYFVL EPRLLAYYKK KPQDYQVPIK TMLIDGNCRV EDRGLKTHHG HMVYVLSVYN KKEKSHRITM AAFNIQEALM
101: WKEKIESVID QHQESQVPNG QQYVSFEYKS GMDTGRTASS SDHESQFSAA EDEEDSRRSL MRRTTIGNGP PESVLDWTKE FDAELANQNS DNQAFSRKHW
201: RLLQCQNGLR IFEELLEVDY LPRSCSRAMK AVGVVEATCE EIFELLMSMD GTRYEWDCSF QFGSLVEEVD GHTAVLYHRL LLDWFPMIVW PRDLCYVRYW
301: RRNDDGSYVV LFRSREHENC GPQPGCVRAH LESGGYNISP LKPRNGRPRT QVQHLIQIDL KGWGAGYLPA FQQHCLLQML NSVAGLREWF SQTDERGVHT
401: RIPVMVNMAS SSLSLTKSGK SLHKSAFSLD QTNSVNRNSL LMDEDSDDDD EFQIAESEQE PETSKPETDV KRPEEEPAHN IDLSCFSGNL KRNENENARN
501: CWRISDGNNF KVRGKNFGQE KRKIPAGKHL MDLVAVDWFK DSKRIDHVAR RKGCAAQVAA EKGLFSMVVN VQVPGSTHYS MVFYFVMKEL VPGSLLQRFV
601: DGDDEFRNSR LKLIPLVPKG SWIVRQSVGS TPCLLGKAVD CNYIRGPTYL EIDVDIGSST VANGVLGLVI GVITSLVVEM AFLVQANTAE EQPERLIGAV
701: RVSHIELSSA IVPNLESE
101: WKEKIESVID QHQESQVPNG QQYVSFEYKS GMDTGRTASS SDHESQFSAA EDEEDSRRSL MRRTTIGNGP PESVLDWTKE FDAELANQNS DNQAFSRKHW
201: RLLQCQNGLR IFEELLEVDY LPRSCSRAMK AVGVVEATCE EIFELLMSMD GTRYEWDCSF QFGSLVEEVD GHTAVLYHRL LLDWFPMIVW PRDLCYVRYW
301: RRNDDGSYVV LFRSREHENC GPQPGCVRAH LESGGYNISP LKPRNGRPRT QVQHLIQIDL KGWGAGYLPA FQQHCLLQML NSVAGLREWF SQTDERGVHT
401: RIPVMVNMAS SSLSLTKSGK SLHKSAFSLD QTNSVNRNSL LMDEDSDDDD EFQIAESEQE PETSKPETDV KRPEEEPAHN IDLSCFSGNL KRNENENARN
501: CWRISDGNNF KVRGKNFGQE KRKIPAGKHL MDLVAVDWFK DSKRIDHVAR RKGCAAQVAA EKGLFSMVVN VQVPGSTHYS MVFYFVMKEL VPGSLLQRFV
601: DGDDEFRNSR LKLIPLVPKG SWIVRQSVGS TPCLLGKAVD CNYIRGPTYL EIDVDIGSST VANGVLGLVI GVITSLVVEM AFLVQANTAE EQPERLIGAV
701: RVSHIELSSA IVPNLESE
Arabidopsis Description
EDR2ENHANCED DISEASE RESISTANCE 2 [Source:TAIR;Acc:AT4G19040]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.