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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 1
  • mitochondrion 5
  • nucleus 1
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d007093_P006 Maize nucleus 94.91 86.57
TraesCS6A01G005000.1 Wheat nucleus 81.71 77.95
EES06097 Sorghum cytosol 82.94 75.47
Os02t0102800-01 Rice plasma membrane 82.67 74.75
TraesCS6B01G010400.2 Wheat plastid 81.98 74.22
HORVU6Hr1G002050.2 Barley plastid 80.06 73.21
EER89092 Sorghum nucleus 73.31 71.07
TraesCS6D01G007600.1 Wheat nucleus 82.12 67.92
Os09t0107600-00 Rice extracellular 8.12 66.29
EER94411 Sorghum cytosol, nucleus, plastid 61.35 61.01
OQU76985 Sorghum cytosol, extracellular, nucleus 13.89 31.08
EER91476 Sorghum nucleus 30.54 29.02
KXG24431 Sorghum plastid 14.31 26.07
EES13904 Sorghum plastid 27.1 25.72
Protein Annotations
Gene3D:2.30.29.30Gene3D:3.30.530.20MapMan:35.1UniProt:A0A1W0W7S6InterPro:EDR2_CGO:GO:0003674
GO:GO:0005488GO:GO:0008289InterPro:IPR001849InterPro:IPR002913InterPro:IPR011993InterPro:IPR023393
EnsemblPlants:OQU90416ProteinID:OQU90416ProteinID:OQU90416.1PFAM:PF01852PFAM:PF07059InterPro:PH-like_dom_sf
InterPro:PH_domainPFscan:PS50003PFscan:PS50848PANTHER:PTHR12136PANTHER:PTHR12136:SF64SMART:SM00234
EnsemblPlantsGene:SORBI_3002G405300SUPFAM:SSF50729SUPFAM:SSF55961InterPro:START-like_dom_sfInterPro:START_lipid-bd_domUniParc:UPI0009DC8CE7
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr2:-:75484202..75489965
Molecular Weight (calculated)
82854.9 Da
IEP (calculated)
6.191
GRAVY (calculated)
-0.569
Length
727 amino acids
Sequence
(BLAST)
001: MVRYGRRKIG RSFFHTRYFV LESRLLAYYK KKPKDNMVPL KSLLIDGNCR VEDRGLKNHH GQMIYVLCVY NQKEKDHQIT MGAHDIEDAL AWKKKIELLI
101: DQQPDSAAKT HKAFATMDFD MELGGQFSLS DHDSAAEDEE ERPTLVRRTT IGNGPPASIH DWTKDADFGM SSQNDPTQLY SKKNWRLLRC QNGLRIYEEL
201: LEVEYLARSC SRAMRAVGVV EATCEAIFGL MMSMDATRYE WDCSFRQGSL VEEVDGHTAV LYHRLQLHWC SRLIWPRDLC YVRYWRRNDD GSYVVLFRST
301: EHPNCNRQRG FVRAFIESGG FKICPLKSRN GRPRTQVQHL MQIDLKGWFL NYSTSFQYHS LLQILNCVAG LREYFSQTDD IHITPRIPAM ESMADVNTAQ
401: KDEKLTEIDS NTKPTDQEHL ENKNMGTIDE ESDDDEEYQV PEADIEESPK KSDNEAKQTD EPPEKIDLSC FSGILHHDPD EKSRNCWTVP DSKLFKVRSK
501: NFPNDKSKIP AASYLMELAA IDWYKDTKRM DNVGRQKNCV AQIAAEKGMH TFIVNLQIPG STHYSMVMYF VTSSLKKGSL LQRFFDGDDD FRNSRLKLIP
601: SVPKGSWIVR QSVGSSPCLL GKALDCSYVR TPRYLEVDVD IGSSAVANGV LGLVFGVVTT LVVDMAFLIQ ANTYEELPEQ VIGAARLSNV EPATAVVPDL
701: ENNSDSNKNN NSNDATSSED DSSKKTN
Best Arabidopsis Sequence Match ( AT5G45560.1 )
(BLAST)
001: MSKVVYEGWM VRYGRRKIGR SYIHMRYFVL EPRLLAYYKK KPQDNQLPIK TMVIDGNCRV EDRGLKTHHG HMVYVLSIYN KKEKHHRITM AAFNIQEALM
101: WKEKIECVID QHQDSLVPSG QQYVSFEYKP GMDAGRTASS SDHESPFSAL EDENDSQRDL LRRTTIGNGP PESILDWTKE FDAELSNQSS SNQAFSRKHW
201: RLLQCQNGLR IFEELLEVDY LPRSCSRAMK AVGVVEATCE EIFELVMSMD GTRYEWDCSF HNGRLVEEVD GHTAILYHRL LLDWFPMVVW PRDLCYVRYW
301: RRNDDGSYVV LFRSREHENC GPQPGFVRAH LESGGFNIAP LKPRNGRPRT QVQHLIQIDL KGWGSGYLPA FQQHCLLQML NSVSGLREWF SQTDDRGQPI
401: RIPVMVNMAS SSLALGKGGK HHHKSSLSID QTNGASRNSV LMDEDSDDDD EFQIPDSEPE PETSKQDQET DAKKTEEPAL NIDLSCFSGN LRHDDNENAR
501: NCWRISDGNN FKVRGKSFCD DKRKIPAGKH LMDLVAVDWF KDTKRMDHVV RRKGCAAQVA AEKGLFSTVV NVQVPGSTHY SMVFYFVTKE LVPGSLFQRF
601: VDGDDEFRNS RLKLIPLVPK GSWIVRQSVG STPCLLGKAV DCNYIRGPTY LEIDVDIGSS TVANGVLGLV IGVITSLVVE MAFLVQANTP EELPERLIGA
701: VRVSHVELSS AIVPNLDSD
Arabidopsis Description
EDR2LProtein ENHANCED DISEASE RESISTANCE 2-like [Source:UniProtKB/Swiss-Prot;Acc:Q8VZF6]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.