CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, nucleus, cytosol

Predictor Summary:

nucleus 2
mitochondrion 1
extracellular 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular, nucleus
Any Predictor:	cytosol, extracellular, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	extracellular
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d014641_P001	Maize	cytosol, extracellular, nucleus	96.62	96.62
TraesCS7D01G417100.2	Wheat	cytosol, mitochondrion, nucleus	80.92	81.93
TraesCS7A01G424300.1	Wheat	cytosol	80.62	81.88
TraesCS7B01G325500.1	Wheat	cytosol	80.92	81.68
HORVU7Hr1G098100.1	Barley	plastid	80.92	74.29
GSMUA_Achr7P15920_001	Banana	cytosol	60.31	59.76
GSMUA_Achr5P04860_001	Banana	plastid	51.08	59.29
VIT_04s0008g07260.t01	Wine grape	cytosol, nucleus, plastid	54.77	58.36
PGSC0003DMT400067616	Potato	cytosol	51.69	57.93
KRH52302	Soybean	cytosol	51.38	57.79
GSMUA_Achr5P21900_001	Banana	cytosol	58.77	57.7
CDX70368	Canola	cytosol, mitochondrion, nucleus, plastid	52.92	56.77
CDX78399	Canola	nucleus, plastid	52.62	56.44
Bra006077.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	52.31	56.11
AT5G10750.1	Thale cress	cytosol, mitochondrion, nucleus, plastid	52.0	55.96
KRH61636	Soybean	cytosol	51.08	55.89
Solyc08g068880.1.1	Tomato	mitochondrion	54.15	55.87
PGSC0003DMT400038272	Potato	mitochondrion	53.85	55.56
KRH15692	Soybean	cytosol	49.54	54.03
Solyc08g006590.1.1	Tomato	cytosol	45.23	52.88
Bra036529.1-P	Field mustard	cytosol	41.23	47.02
KRH05337	Soybean	cytosol	37.85	45.39
AT5G24990.1	Thale cress	cytosol	39.08	43.2
Bra009809.1-P	Field mustard	cytosol	37.23	42.91
CDX88150	Canola	cytosol	36.92	42.55
CDX80479	Canola	cytoskeleton, cytosol, nucleus	38.15	42.32
Bra009807.1-P	Field mustard	cytosol	38.15	42.32
AT5G25010.1	Thale cress	cytosol	36.92	41.96
CDY05382	Canola	cytosol	33.54	40.52
AT5G25020.1	Thale cress	cytosol	33.23	40.15
CDX88148	Canola	cytosol	32.31	39.77
CDX80480	Canola	cytosol	24.62	39.02
KXG24431	Sorghum	plastid	34.46	28.07
EER94411	Sorghum	cytosol, nucleus, plastid	32.62	14.5
OQU90416	Sorghum	mitochondrion	31.08	13.89
EES13904	Sorghum	plastid	31.08	13.19
EER89092	Sorghum	nucleus	30.15	13.07
EES06097	Sorghum	cytosol	29.54	12.02
EER91476	Sorghum	nucleus	26.77	11.37

Protein Annotations

EnsemblPlants:OQU76985	EnsemblPlantsGene:SORBI_3010G248000	InterPro:EDR2_C	PANTHER:PTHR12136	PANTHER:PTHR12136:SF38	PFAM:PF07059
ProteinID:OQU76985	ProteinID:OQU76985.1	SEG:seg	UniParc:UPI0009DC9298	UniProt:A0A1W0VUQ0	MapMan:35.1

Description

hypothetical protein

Coordinates

chr10:-:58800207..58801356

Molecular Weight (calculated)

34944.5 Da

IEP (calculated)

8.871

GRAVY (calculated)

-0.261

Length

325 amino acids

Sequence
(BLAST)

001: MCPTKPDRPG QAATAAGSVE KSWREEAVAA GSLRLVDLDR GANGWASPPG DLFHLRARGY FNSGGGKRGK APSAADWLLR PAGVDWLRSH ARLDHVLARD
101: DNSVAAAFRR ARLRKDPTAH FLLAVNLQVP GRPDAYSAVF YFAAEAPIPP DSLLGRFIHG DDAYRNARFK IANRIVKGPW LVRATVGNYA ACLLGRALTC
201: RYHKGDDYLE IDVDIGSSAI ASAILHLALG AVTSVTIDMG FLVESQSEEE LPERLFGAVR IAQMEMGASK YVELPPDEAM PETAGRAGAG FRVSSAKVVN
301: HSRQQDHAGG KVGRSMSCPE RESGG

Best Arabidopsis Sequence Match ( AT5G10750.1 )
(BLAST)

001: MSPSKQRHRS STGENKSKPV RSASSSAIPE WITESTNGGS LRRVDPDTGT DGWASPPGDV FSLRSDSYLS KKQKTPAGDY LLSPAGMDWL KSSTKLENAL
101: ARPDNRVAHA LRKAQSRGQS LKSFIFAVNL QIPGKDHHSA VFYFATEEPI PSGSLLHRFI NGDDAFRNQR FKIVNRIVKG PWVVKAAVGN YSACLLGKAL
201: TCNYHRGPNY FEIDVDISSS AIATAILRLA LGYVTSVTID MGFLAEAQTE EELPERLIGA VRVCQMEMSS AFVVDAPPPQ QLPSQPCRTL SSAKVNHDED
301: ED

Arabidopsis Description

At5g10750 [Source:UniProtKB/TrEMBL;Acc:Q9LEW4]
SUBAcon: [mitochondrion,plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.