Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 2
- cytosol 1
- plastid 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX78399 | Canola | nucleus, plastid | 93.38 | 93.07 |
| Bra006077.1-P | Field mustard | cytosol, mitochondrion, nucleus, plastid | 93.05 | 92.74 |
| CDX70368 | Canola | cytosol, mitochondrion, nucleus, plastid | 93.05 | 92.74 |
| KRH52302 | Soybean | cytosol | 70.2 | 73.36 |
| KRH61636 | Soybean | cytosol | 68.87 | 70.03 |
| KRH15692 | Soybean | cytosol | 66.56 | 67.45 |
| VIT_04s0008g07260.t01 | Wine grape | cytosol, nucleus, plastid | 67.88 | 67.21 |
| PGSC0003DMT400067616 | Potato | cytosol | 59.27 | 61.72 |
| Solyc08g068880.1.1 | Tomato | mitochondrion | 62.58 | 60.0 |
| AT5G25010.1 | Thale cress | cytosol | 56.29 | 59.44 |
| PGSC0003DMT400038272 | Potato | mitochondrion | 61.92 | 59.37 |
| AT5G24990.1 | Thale cress | cytosol | 56.95 | 58.5 |
| AT5G25020.1 | Thale cress | cytosol | 51.66 | 57.99 |
| Solyc08g006590.1.1 | Tomato | cytosol | 51.66 | 56.12 |
| GSMUA_Achr5P04860_001 | Banana | plastid | 51.99 | 56.07 |
| GSMUA_Achr5P21900_001 | Banana | cytosol | 61.26 | 55.89 |
| KRH05337 | Soybean | cytosol | 50.0 | 55.72 |
| GSMUA_Achr7P15920_001 | Banana | cytosol | 60.26 | 55.49 |
| TraesCS7D01G417100.2 | Wheat | cytosol, mitochondrion, nucleus | 56.62 | 53.27 |
| Zm00001d014641_P001 | Maize | cytosol, extracellular, nucleus | 57.28 | 53.23 |
| TraesCS7A01G424300.1 | Wheat | cytosol | 56.29 | 53.12 |
| TraesCS7B01G325500.1 | Wheat | cytosol | 56.29 | 52.8 |
| OQU76985 | Sorghum | cytosol, extracellular, nucleus | 55.96 | 52.0 |
| Zm00001d036506_P001 | Maize | extracellular, nucleus, plastid | 54.64 | 50.46 |
| HORVU7Hr1G098100.1 | Barley | plastid | 56.29 | 48.02 |
| AT1G06050.1 | Thale cress | cytosol | 39.74 | 38.34 |
| AT5G45560.1 | Thale cress | mitochondrion | 37.75 | 15.86 |
| AT4G19040.2 | Thale cress | mitochondrion | 37.09 | 15.49 |
| AT2G28320.1 | Thale cress | cytosol | 33.77 | 13.84 |
| AT5G35180.4 | Thale cress | cytosol | 33.77 | 12.58 |
| AT3G54800.1 | Thale cress | cytosol | 30.13 | 12.41 |
Protein Annotations
| MapMan:35.1 | EntrezGene:830942 | ProteinID:AED91592.1 | ArrayExpress:AT5G10750 | EnsemblPlantsGene:AT5G10750 | RefSeq:AT5G10750 |
| TAIR:AT5G10750 | RefSeq:AT5G10750-TAIR-G | EnsemblPlants:AT5G10750.1 | TAIR:AT5G10750.1 | EMBL:BT020402 | EMBL:BT020482 |
| ProteinID:CAB96830.1 | InterPro:EDR2_C | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008289 |
| RefSeq:NP_196636.1 | PFAM:PF07059 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PANTHER:PTHR12136 |
| PANTHER:PTHR12136:SF88 | UniProt:Q9LEW4 | UniParc:UPI000009D9BF | : | : | : |
Description
At5g10750 [Source:UniProtKB/TrEMBL;Acc:Q9LEW4]
Coordinates
chr5:+:3398790..3400281
Molecular Weight (calculated)
33023.0 Da
IEP (calculated)
8.321
GRAVY (calculated)
-0.403
Length
302 amino acids
Sequence
(BLAST)
(BLAST)
001: MSPSKQRHRS STGENKSKPV RSASSSAIPE WITESTNGGS LRRVDPDTGT DGWASPPGDV FSLRSDSYLS KKQKTPAGDY LLSPAGMDWL KSSTKLENAL
101: ARPDNRVAHA LRKAQSRGQS LKSFIFAVNL QIPGKDHHSA VFYFATEEPI PSGSLLHRFI NGDDAFRNQR FKIVNRIVKG PWVVKAAVGN YSACLLGKAL
201: TCNYHRGPNY FEIDVDISSS AIATAILRLA LGYVTSVTID MGFLAEAQTE EELPERLIGA VRVCQMEMSS AFVVDAPPPQ QLPSQPCRTL SSAKVNHDED
301: ED
101: ARPDNRVAHA LRKAQSRGQS LKSFIFAVNL QIPGKDHHSA VFYFATEEPI PSGSLLHRFI NGDDAFRNQR FKIVNRIVKG PWVVKAAVGN YSACLLGKAL
201: TCNYHRGPNY FEIDVDISSS AIATAILRLA LGYVTSVTID MGFLAEAQTE EELPERLIGA VRVCQMEMSS AFVVDAPPPQ QLPSQPCRTL SSAKVNHDED
301: ED
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.