Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G417100.2 | Wheat | cytosol, mitochondrion, nucleus | 97.52 | 97.82 |
| TraesCS7A01G424300.1 | Wheat | cytosol | 97.2 | 97.81 |
| HORVU7Hr1G098100.1 | Barley | plastid | 95.65 | 87.01 |
| Zm00001d014641_P001 | Maize | cytosol, extracellular, nucleus | 81.68 | 80.92 |
| OQU76985 | Sorghum | cytosol, extracellular, nucleus | 81.68 | 80.92 |
| Zm00001d036506_P001 | Maize | extracellular, nucleus, plastid | 79.19 | 77.98 |
| VIT_04s0008g07260.t01 | Wine grape | cytosol, nucleus, plastid | 54.35 | 57.38 |
| PGSC0003DMT400067616 | Potato | cytosol | 51.55 | 57.24 |
| PGSC0003DMT400038272 | Potato | mitochondrion | 55.59 | 56.83 |
| GSMUA_Achr7P15920_001 | Banana | cytosol | 57.76 | 56.71 |
| Solyc08g068880.1.1 | Tomato | mitochondrion | 55.28 | 56.51 |
| Bra006077.1-P | Field mustard | cytosol, mitochondrion, nucleus, plastid | 53.11 | 56.44 |
| CDX70368 | Canola | cytosol, mitochondrion, nucleus, plastid | 53.11 | 56.44 |
| KRH52302 | Soybean | cytosol | 50.62 | 56.4 |
| AT5G10750.1 | Thale cress | cytosol, mitochondrion, nucleus, plastid | 52.8 | 56.29 |
| CDX78399 | Canola | nucleus, plastid | 52.8 | 56.11 |
| GSMUA_Achr5P04860_001 | Banana | plastid | 48.76 | 56.07 |
| GSMUA_Achr5P21900_001 | Banana | cytosol | 57.14 | 55.59 |
| KRH61636 | Soybean | cytosol | 50.0 | 54.21 |
| KRH15692 | Soybean | cytosol | 49.07 | 53.02 |
| Solyc08g006590.1.1 | Tomato | cytosol | 45.65 | 52.88 |
| Bra036529.1-P | Field mustard | cytosol | 42.24 | 47.72 |
| AT5G24990.1 | Thale cress | cytosol | 40.06 | 43.88 |
| Bra009807.1-P | Field mustard | cytosol | 39.44 | 43.34 |
| CDX88150 | Canola | cytosol | 37.89 | 43.26 |
| Bra009809.1-P | Field mustard | cytosol | 37.89 | 43.26 |
| KRH05337 | Soybean | cytosol | 36.34 | 43.17 |
| AT5G25010.1 | Thale cress | cytosol | 38.2 | 43.01 |
| CDX80479 | Canola | cytoskeleton, cytosol, nucleus | 38.82 | 42.66 |
| AT5G25020.1 | Thale cress | cytosol | 35.09 | 42.01 |
| CDX88148 | Canola | cytosol | 33.85 | 41.29 |
| CDY05382 | Canola | cytosol | 34.16 | 40.89 |
| CDX80480 | Canola | cytosol | 25.47 | 40.0 |
| TraesCS7B01G203900.1 | Wheat | cytosol | 35.09 | 36.57 |
| TraesCS7B01G458700.1 | Wheat | cytosol, plastid | 32.92 | 14.62 |
| TraesCS5B01G170400.1 | Wheat | cytosol | 32.3 | 13.72 |
| TraesCS6B01G010400.2 | Wheat | plastid | 29.81 | 11.96 |
| TraesCS1B01G173600.1 | Wheat | nucleus | 27.33 | 11.59 |
Protein Annotations
| EnsemblPlants:TraesCS7B01G325500.1 | EnsemblPlantsGene:TraesCS7B01G325500 | InterPro:EDR2_C | PANTHER:PTHR12136 | PANTHER:PTHR12136:SF38 | PFAM:PF07059 |
| SEG:seg | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr7B:+:578193880..578196608
Molecular Weight (calculated)
34897.2 Da
IEP (calculated)
9.300
GRAVY (calculated)
-0.409
Length
322 amino acids
Sequence
(BLAST)
(BLAST)
001: MPPTTPQRRK QDEPGGGGDN WREEAVSAGS LRQVDLDRGS NGWAAPPGDL FQLRARGYFS GGGGKRGKSA ASADWLLRPA GVDWLRSHAR LDHLLARDDV
101: PVAAAFRRAR LRKDPNAHFL LAVNLQVPGR PDAYSSVFYF AAEAPIPPDS LLGRFVYGDD AYRNARFKIV NRIVKGPWLV RATVGNYGAC LLGRALTCRY
201: HRGDDYLEID VDIGSSAIAT AILHLALGAV TSVTIDMGFL VESQSEEELP EKLFGAVRIA QMEMGSAKYV ETASDEPETA GKAQPGFRVG SARVANDSRH
301: QERTSGKASR SMSCQERLGG GK
101: PVAAAFRRAR LRKDPNAHFL LAVNLQVPGR PDAYSSVFYF AAEAPIPPDS LLGRFVYGDD AYRNARFKIV NRIVKGPWLV RATVGNYGAC LLGRALTCRY
201: HRGDDYLEID VDIGSSAIAT AILHLALGAV TSVTIDMGFL VESQSEEELP EKLFGAVRIA QMEMGSAKYV ETASDEPETA GKAQPGFRVG SARVANDSRH
301: QERTSGKASR SMSCQERLGG GK
001: MSPSKQRHRS STGENKSKPV RSASSSAIPE WITESTNGGS LRRVDPDTGT DGWASPPGDV FSLRSDSYLS KKQKTPAGDY LLSPAGMDWL KSSTKLENAL
101: ARPDNRVAHA LRKAQSRGQS LKSFIFAVNL QIPGKDHHSA VFYFATEEPI PSGSLLHRFI NGDDAFRNQR FKIVNRIVKG PWVVKAAVGN YSACLLGKAL
201: TCNYHRGPNY FEIDVDISSS AIATAILRLA LGYVTSVTID MGFLAEAQTE EELPERLIGA VRVCQMEMSS AFVVDAPPPQ QLPSQPCRTL SSAKVNHDED
301: ED
101: ARPDNRVAHA LRKAQSRGQS LKSFIFAVNL QIPGKDHHSA VFYFATEEPI PSGSLLHRFI NGDDAFRNQR FKIVNRIVKG PWVVKAAVGN YSACLLGKAL
201: TCNYHRGPNY FEIDVDISSS AIATAILRLA LGYVTSVTID MGFLAEAQTE EELPERLIGA VRVCQMEMSS AFVVDAPPPQ QLPSQPCRTL SSAKVNHDED
301: ED
Arabidopsis Description
At5g10750 [Source:UniProtKB/TrEMBL;Acc:Q9LEW4]
SUBAcon: [mitochondrion,plastid,nucleus,cytosol]
SUBAcon: [mitochondrion,plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.