Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G173000.1 | Wheat | cytosol | 98.55 | 98.68 |
| TraesCS5D01G177500.2 | Wheat | cytosol | 98.94 | 98.43 |
| HORVU5Hr1G053070.9 | Barley | cytosol, nucleus | 95.51 | 95.51 |
| EES13904 | Sorghum | plastid | 83.51 | 82.64 |
| Zm00001d032166_P003 | Maize | endoplasmic reticulum, plasma membrane | 39.97 | 81.67 |
| Os08t0439100-01 | Rice | plasma membrane | 81.53 | 81.0 |
| GSMUA_Achr9P13170_001 | Banana | nucleus | 64.38 | 64.98 |
| KRH20109 | Soybean | cytosol, nucleus | 61.61 | 62.52 |
| KRH03545 | Soybean | nucleus | 60.95 | 62.18 |
| Solyc07g005000.2.1 | Tomato | cytosol | 60.16 | 60.56 |
| KRH12970 | Soybean | cytosol | 57.12 | 59.15 |
| CDY58454 | Canola | cytosol | 57.65 | 57.05 |
| Bra038938.1-P | Field mustard | nucleus | 57.78 | 56.88 |
| CDY41767 | Canola | extracellular, golgi | 7.12 | 56.84 |
| CDY41766 | Canola | nucleus | 57.92 | 55.99 |
| AT5G35180.4 | Thale cress | cytosol | 58.84 | 54.99 |
| TraesCS7B01G203900.1 | Wheat | cytosol | 13.46 | 33.01 |
| TraesCS7B01G325500.1 | Wheat | cytosol | 13.72 | 32.3 |
| TraesCS7B01G458700.1 | Wheat | cytosol, plastid | 27.18 | 28.41 |
| TraesCS1B01G173600.1 | Wheat | nucleus | 25.59 | 25.56 |
| TraesCS6B01G010400.2 | Wheat | plastid | 26.12 | 24.66 |
Protein Annotations
| Gene3D:3.30.530.20 | MapMan:35.1 | InterPro:EDR2_C | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005623 | GO:GO:0005886 | GO:GO:0008289 | GO:GO:0016020 | InterPro:IPR001849 | InterPro:IPR002913 |
| InterPro:IPR023393 | PFAM:PF01852 | PFAM:PF07059 | InterPro:PH_domain | PFscan:PS50848 | PANTHER:PTHR12136 |
| PANTHER:PTHR12136:SF49 | SMART:SM00233 | SUPFAM:SSF50729 | SUPFAM:SSF55961 | InterPro:START-like_dom_sf | InterPro:START_lipid-bd_dom |
| EnsemblPlantsGene:TraesCS5B01G170400 | EnsemblPlants:TraesCS5B01G170400.1 | TIGR:cd00177 | TIGR:cd00821 | SEG:seg | : |
Description
No Description!
Coordinates
chr5B:+:315157202..315183471
Molecular Weight (calculated)
85184.0 Da
IEP (calculated)
7.277
GRAVY (calculated)
-0.449
Length
758 amino acids
Sequence
(BLAST)
(BLAST)
001: MAATTTQPPS PLPPAGEVIE VENSEPGSPD AGSRSSGSGR SSSEYSGWVY HLGVNSIGHE YCHLRFLVIR GKCVAMYKRD PHDNPGLEPI RKGFVSHTLV
101: VEEVGRKKVN HGDVYVLRLY SRLDQTKKGE IACATPGEAQ KWTEAFEQAK QQAEYDLTRG ANWNRLQSEN EFNLDGHRRR VRRGLGKLVR IGKGPEMLLR
201: QSSDLQSHER VNTNFGGDTG DALEAHEWRF VRTLNGIRIF EDIANSKGGK GILLKSIGVV GANPDSVFEM VLSRDKHKRH EWDMLISDLE LVETIDGYCD
301: VVYGTYEPKY LNWWKSKKDF VFSRQWFRGQ DGAYNILQSP ASHKQKPPRH EYERTHINPT TWEIKRLNTS ESTPKCIVTR MVEISPSFWD RWRRRTSSNF
401: ERSIPFALLS QVAGLREYFA ANPAITPDFP STVVKSKVSE SLIIQSELEY SEPNDEFYDA LVRGESFEGD SDDDDNDDDD VTTPKAGKVK LKNVSWAIAG
501: LAMKRTKASL ERSELVTNSI PIAIDMSHFH GTVRQAKSED DPNSWSSPGG EKFMIRGKTY LTDYAKIAGG DPLLKLIAVD WFKVNERFDS VALHPKSLVQ
601: SEAAKKIPFI LVVNLQVPAK PNYNLVMYYA AEKPVNKDSL LGRFIDGTDA FRDARFKLIP SIVEGYWMVK RAVGTRACLL GKAVTCNYLR QDNFLEIDVD
701: IGSSSVARSI IGLVLGYVTS IVVDLAILVE AKEEKELPEY ILGTVRLNRV NPEAAVPI
101: VEEVGRKKVN HGDVYVLRLY SRLDQTKKGE IACATPGEAQ KWTEAFEQAK QQAEYDLTRG ANWNRLQSEN EFNLDGHRRR VRRGLGKLVR IGKGPEMLLR
201: QSSDLQSHER VNTNFGGDTG DALEAHEWRF VRTLNGIRIF EDIANSKGGK GILLKSIGVV GANPDSVFEM VLSRDKHKRH EWDMLISDLE LVETIDGYCD
301: VVYGTYEPKY LNWWKSKKDF VFSRQWFRGQ DGAYNILQSP ASHKQKPPRH EYERTHINPT TWEIKRLNTS ESTPKCIVTR MVEISPSFWD RWRRRTSSNF
401: ERSIPFALLS QVAGLREYFA ANPAITPDFP STVVKSKVSE SLIIQSELEY SEPNDEFYDA LVRGESFEGD SDDDDNDDDD VTTPKAGKVK LKNVSWAIAG
501: LAMKRTKASL ERSELVTNSI PIAIDMSHFH GTVRQAKSED DPNSWSSPGG EKFMIRGKTY LTDYAKIAGG DPLLKLIAVD WFKVNERFDS VALHPKSLVQ
601: SEAAKKIPFI LVVNLQVPAK PNYNLVMYYA AEKPVNKDSL LGRFIDGTDA FRDARFKLIP SIVEGYWMVK RAVGTRACLL GKAVTCNYLR QDNFLEIDVD
701: IGSSSVARSI IGLVLGYVTS IVVDLAILVE AKEEKELPEY ILGTVRLNRV NPEAAVPI
001: MTSPGSKKVV TTDDGSEKKV SGNLGKVSFS GDLNHSGSHS GSHSRSSSSA GGGEGGTFEY FGWVYHLGVN KIGHEYCNLR FLFIRGKYVE MYKRDPHENP
101: DIKPIRRGVI GPTMVIEELG RRKVNHGDVY VIRFYNRLDE SRKGEIACAT AGEALKWVEA FEEAKQQAEY ALSRGGSTRT KLSMEANIDL EGHRPRVRRY
201: AYGLKKLIRI GQGPESLLRQ SSTLVNDVRG DGFYEGGDNG DAIEAHEWKC VRTINGVRIF EDVANFKAGR GVLVKAVAVV EASADTVFEV LLNIDKHQRY
301: EWDAVTGDSE KIDSYEGHYD VIYCIYDPKY LSRWQSKRDF VFSRQWVRGQ DGTYTILQFP AVHKKRPAKS GYRRTEITPS TWEIKSLKKR SDAETPSCLV
401: THMLEIHSKR WCKWKRTSYS KFEKTIPYAL LLQVAGLKEY IGANPAFKYE TSATVVQSKF QDVPNGEYVD EEMEEQFYDA TDSSSGEEDE EESDDDDENQ
501: DNKEIKVKLK NVSWAIASLS LKRPKAPGAS NVLDASVDPV SIDPSQFQGS LRKGNGDKDS NCWNSPSGMG FMIRGKTYLK DNAKVMGGQP LLTLISVDWF
601: KVDSAVDNIA LHPKCLIQSE PGKKLPFILV INLQVPAKPN YCLVLYYAAD RPVNKTSSLG KFVDGSDSYR DARFKLIPSI VQGYWMVKRA VGTKACLLGK
701: AVTCKYLRQD NFLEIDVDIG SSAVARSVIG LVLGYVTSLI VDLAILIEGK EESDLPEYIL GTVRLNRIEL DSAVSFEV
101: DIKPIRRGVI GPTMVIEELG RRKVNHGDVY VIRFYNRLDE SRKGEIACAT AGEALKWVEA FEEAKQQAEY ALSRGGSTRT KLSMEANIDL EGHRPRVRRY
201: AYGLKKLIRI GQGPESLLRQ SSTLVNDVRG DGFYEGGDNG DAIEAHEWKC VRTINGVRIF EDVANFKAGR GVLVKAVAVV EASADTVFEV LLNIDKHQRY
301: EWDAVTGDSE KIDSYEGHYD VIYCIYDPKY LSRWQSKRDF VFSRQWVRGQ DGTYTILQFP AVHKKRPAKS GYRRTEITPS TWEIKSLKKR SDAETPSCLV
401: THMLEIHSKR WCKWKRTSYS KFEKTIPYAL LLQVAGLKEY IGANPAFKYE TSATVVQSKF QDVPNGEYVD EEMEEQFYDA TDSSSGEEDE EESDDDDENQ
501: DNKEIKVKLK NVSWAIASLS LKRPKAPGAS NVLDASVDPV SIDPSQFQGS LRKGNGDKDS NCWNSPSGMG FMIRGKTYLK DNAKVMGGQP LLTLISVDWF
601: KVDSAVDNIA LHPKCLIQSE PGKKLPFILV INLQVPAKPN YCLVLYYAAD RPVNKTSSLG KFVDGSDSYR DARFKLIPSI VQGYWMVKRA VGTKACLLGK
701: AVTCKYLRQD NFLEIDVDIG SSAVARSVIG LVLGYVTSLI VDLAILIEGK EESDLPEYIL GTVRLNRIEL DSAVSFEV
Arabidopsis Description
Protein of unknown function (DUF1336) [Source:TAIR;Acc:AT5G35180]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.