Factsheet for Os08t0439100-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 2
cytosol 3
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d032166_P003	Maize	endoplasmic reticulum, plasma membrane	41.28	84.91
EES13904	Sorghum	plastid	84.8	84.46
TraesCS5A01G173000.1	Wheat	cytosol	81.39	82.03
TraesCS5D01G177500.2	Wheat	cytosol	81.52	81.63
TraesCS5B01G170400.1	Wheat	cytosol	81.0	81.53
HORVU5Hr1G053070.9	Barley	cytosol, nucleus	80.6	81.13
GSMUA_Achr9P13170_001	Banana	nucleus	64.88	65.91
KRH20109	Soybean	cytosol, nucleus	63.17	64.52
KRH03545	Soybean	nucleus	62.52	64.2
Solyc07g005000.2.1	Tomato	cytosol	61.47	62.28
CDY41767	Canola	extracellular, golgi	7.47	60.0
KRH12970	Soybean	cytosol	57.54	59.97
CDY58454	Canola	cytosol	59.11	58.88
Bra038938.1-P	Field mustard	nucleus	59.24	58.7
CDY41766	Canola	nucleus	59.5	57.91
AT5G35180.4	Thale cress	cytosol	59.76	56.23
Os10t0479800-01	Rice	cytosol	8.26	52.5
Os09t0107600-00	Rice	extracellular	4.33	37.08
Os08t0152600-01	Rice	cytosol	13.63	28.81
Os02t0102800-01	Rice	plasma membrane	27.79	26.37
Os10t0455900-01	Rice	plasma membrane	10.22	24.76
Os06t0116500-01	Rice	plastid	9.96	20.77

Protein Annotations

Gene3D:3.30.530.20	MapMan:35.1	EntrezGene:4345676	EMBL:AK067282	ProteinID:BAD09877.1	ProteinID:BAF23811.1
ProteinID:BAT05611.1	InterPro:EDR2_C	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0008289	GO:GO:0016020	InterPro:IPR002913	InterPro:IPR023393	EnsemblPlantsGene:Os08g0439100
EnsemblPlants:Os08t0439100-01	PFAM:PF01852	PFAM:PF07059	PFscan:PS50848	PANTHER:PTHR12136	PANTHER:PTHR12136:SF49
UniProt:Q6Z9J1	SUPFAM:SSF55961	InterPro:START-like_dom_sf	InterPro:START_lipid-bd_dom	UniParc:UPI000023AF59	RefSeq:XP_015650076.1
SEG:seg	:	:	:	:	:

Description

Protein of unknown function DUF1336 domain containing protein. (Os08t0439100-01)

Coordinates

chr8:+:21337639..21352748

Molecular Weight (calculated)

85247.2 Da

IEP (calculated)

8.179

GRAVY (calculated)

-0.425

Length

763 amino acids

Sequence
(BLAST)

001: MATITLKPPA TAAAAGGEVS EVELSEAGSP DVGSQSSGSG GSGRSTAGSS GWVYHLGVNS IGHEYRHLRF LVIRGKTVAM YKRDPSKNPG IQPIRKGVVS
101: HTLMVEELGR RITSHGELYV LRFYNRLDQT KKGEIACGDP GEARKWVEAF EQAKQQADYD LMTRGVSWNR SQNENELNLD GHRPRVRRYA QGLGKLVRIG
201: KGPEKLLRQS SNLQSHEIIN TNFGGDSGDA FEAHEWRYVR TFNGIRIFED IANTKGGKGV LLKSVGVVGA NPDTVFAVVL SSDKHKRYEW DMLTADLELV
301: ETIDGYYDVV YGTYEPRYLS WWKTKKDFVF SRQWFRGQDG AYTILQIPAC HKNKPPRHGY ERTKINSSTW ELRRLNPPGS STPKCLVTHM LEMSPSFWDR
401: WKRRHNENFD RSIAFALLSQ VAGLREYFAA NPALTSDLPS TVVKPKQSDS LIIQSELEDS ELNDEFYDAL ARGESFEDED SDDDDDMIPK AGKVKFKNIS
501: WAIAGLAMKP TKASVEKSEL VTNSTPVTID SNHFHGTLRR AKSENDPNSW SEPGGEKFMI RGKTYLTDYT KVVGGDPLLK LIAVDWFKAD ERFDSVALHP
601: KSLVQSEAAK KIPFILVINL QVPAKPNYNL VMYYAAERPV NKDSLLGRFI DGTDAFRDAR FKLIPSIVEG YWMVKRAVGT KACLLGKAVT CNYLRQDNFL
701: EIDVDIGSSS VARSIIGLVL GYVTGLVVDL AILIEAKEEK ELPEYILGTV RLNRANPDSA VPI

Best Arabidopsis Sequence Match ( AT5G35180.2 )
(BLAST)

001: MTSPGSKKVV TTDDGSEKKV SGNLGKVSFS GDLNHSGSHS GSHSRSSSSA GGGEGGTFEY FGWVYHLGVN KIGHEYCNLR FLFIRGKYVE MYKRDPHENP
101: DIKPIRRGVI GPTMVIEELG RRKVNHGDVY VIRFYNRLDE SRKGEIACAT AGEALKWVEA FEEAKQQAEY ALSRGGSTRT KLSMEANIDL EGHRPRVRRY
201: AYGLKKLIRI GQGPESLLRQ SSTLVNDVRG DGFYEGGDNG DAIEAHEWKC VRTINGVRIF EDVANFKAGR GVLVKAVAVV EASADTVFEV LLNIDKHQRY
301: EWDAVTGDSE KIDSYEGHYD VIYCIYDPKY LSRWQSKRDF VFSRQWVRGQ DGTYTILQFP AVHKKRPAKS GYRRTEITPS TWEIKSLKKR SDAETPSCLV
401: THMLEIHSKR WCKWKRTSYS KFEKTIPYAL LLQVAGLKEY IGANPAFKYE TSATVVQSKF QDVPNGEYVD EEMEEQFYDA TDSSSGEEDE EESDDDDENQ
501: DNKEIKVKLK NVSWAIASLS LKRPKAPGAS NVLDASVDPV SIDPSQFQGS LRKGNGDKDS NCWNSPSGMG FMIRGKTYLK DNAKVMGGQP LLTLISVDWF
601: KVDSAVDNIA LHPKCLIQSE PGKKLPFILV INLQVPAKPN YCLVLYYAAD RPVNKTSSLG KFVDGSDSYR DARFKLIPSI VQGYWMVKRA VGTKACLLGK
701: AVTCKYLRQD NFLEIDVDIG SSAVARSVIG LVLGYVTSLI VDLAILIEGK EESDLPEYIL GTVRLNRIEL DSAVSFEV

Arabidopsis Description

Protein of unknown function (DUF1336) [Source:TAIR;Acc:AT5G35180]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.