Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- peroxisome 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr4P18250_001 | Banana | mitochondrion | 87.5 | 33.65 |
| Os09t0107600-00 | Rice | extracellular | 21.67 | 29.21 |
| GSMUA_Achr11P... | Banana | cytosol | 80.0 | 17.14 |
| TraesCS1D01G155000.1 | Wheat | nucleus | 98.33 | 15.55 |
| TraesCS1B01G173600.1 | Wheat | nucleus | 98.33 | 15.55 |
| TraesCS1A01G156500.1 | Wheat | nucleus | 98.33 | 15.55 |
| EER91476 | Sorghum | nucleus | 98.33 | 15.42 |
| Zm00001d032685_P001 | Maize | nucleus | 98.33 | 15.38 |
| HORVU1Hr1G041740.29 | Barley | extracellular, nucleus, plasma membrane | 98.33 | 15.21 |
| Os08t0152600-01 | Rice | cytosol | 45.0 | 14.96 |
| KRH26439 | Soybean | cytosol, extracellular, nucleus, plastid | 89.17 | 14.54 |
| KRH22877 | Soybean | plastid | 89.17 | 14.5 |
| CDY04553 | Canola | cytosol | 86.67 | 14.23 |
| Bra011959.1-P | Field mustard | cytosol | 86.67 | 14.19 |
| CDX71361 | Canola | cytosol | 86.67 | 14.19 |
| AT2G28320.1 | Thale cress | cytosol | 85.83 | 13.98 |
| Solyc11g069530.1.1 | Tomato | cytosol | 85.0 | 13.97 |
| Solyc06g075130.2.1 | Tomato | nucleus | 82.5 | 13.94 |
| GSMUA_Achr5P14640_001 | Banana | cytosol, extracellular, mitochondrion, nucleus | 85.0 | 13.86 |
| VIT_06s0004g02720.t01 | Wine grape | cytosol | 83.33 | 13.62 |
| GSMUA_Achr2P00220_001 | Banana | nucleus | 76.67 | 13.49 |
| PGSC0003DMT400062486 | Potato | nucleus | 81.67 | 13.39 |
| Os08t0439100-01 | Rice | plasma membrane | 52.5 | 8.26 |
| Os02t0102800-01 | Rice | plasma membrane | 54.17 | 8.08 |
| Os10t0455900-01 | Rice | plasma membrane | 10.0 | 3.81 |
| Os06t0116500-01 | Rice | plastid | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Os10t0479800-01 | EnsemblPlantsGene:Os10g0479800 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0008289 | InterPro:EDR2_C |
| PANTHER:PTHR12136 | PANTHER:PTHR12136:SF86 | PFAM:PF07059 | ProteinID:BAF26785.1 | ProteinID:BAT11327.1 | UniParc:UPI0000DD99FA |
| UniProt:Q0IWY0 | MapMan:35.1 | : | : | : | : |
Description
Protein of unknown function DUF1336 domain containing protein. (Os10t0479800-01)
Coordinates
chr10:+:18038745..18040810
Molecular Weight (calculated)
13257.0 Da
IEP (calculated)
5.124
GRAVY (calculated)
0.122
Length
120 amino acids
Sequence
(BLAST)
(BLAST)
001: ERFVNGDDAF RNSRFKLIPY ISKGSWIVKQ SVGKKACLVG QALEINYFRG SNYLELGVDI GSSTVARGVV SLVLGYLNNL VIEMAFLVQG NTQEELPEFL
101: LGTCRLNYLD ASKAVSIDEC
101: LGTCRLNYLD ASKAVSIDEC
001: MAFGSENESE TKMEGWLYII RSNRFGLHFS RKRYFVLGDH LLKSFKSISD SKTKNAGRSA VIDSCIRVTD NGRENVHRKA FFIFTLYNTS NHNDQLKLGA
101: SSPEDAARWI NLIKEAALKG APFPGDVFNC SRSRWDSLRL SSSVRDHHSN SIDWTLRSSA RVDPVTTDVV APSPWTIFGC QNGLRLFKEA KERDSLGRWD
201: DHPAIMAVGV VDGTSETIFQ TLLSLGPSRS EWDFCFYQGS VVEHLDGHTD IIHKQLYSDW LPWGMKRRDF SLRRYWRRED DGTYVILYHS VFHKKCPPQK
301: GYVRACLKSG GYVISPIDNG KQSVVKHMLA VDWKSWRSYV KPSLARSITV KMLGRISALR ELFRAKHGSF PPNLSSGELS RSARLTQNED GVFGDSSLRE
401: NEMFKDTANE ERDKFPSERS SLVDLDEFFD VPEPSDNDNL DDSWTSDFDL DTCCQESRQP KLNSATSLVK KLHDLAVQKR GYVDLHERAK EESSPHATCN
501: PPCCYGTTLP TDPSCDLPCS WTTTDPSTFL IRGKTYLDDQ KKVKAKGTLM EMVAADWLKS DKREDDLGSR PGGIVQKYAA KGGPEFFFIV NIQVPGSTTY
601: SLVLYYMMST PIEEHPLLVS FVNGDDAYRN SRFKLIPYIS KGSWIVKQSV GKKACLIGQA LEINYFRGKN YIELGVDIGS STVARGVVSL VLGYLNKLVI
701: EMAFLIQANT EEELPEYLLG TCRFNHLDAS KAISIIP
101: SSPEDAARWI NLIKEAALKG APFPGDVFNC SRSRWDSLRL SSSVRDHHSN SIDWTLRSSA RVDPVTTDVV APSPWTIFGC QNGLRLFKEA KERDSLGRWD
201: DHPAIMAVGV VDGTSETIFQ TLLSLGPSRS EWDFCFYQGS VVEHLDGHTD IIHKQLYSDW LPWGMKRRDF SLRRYWRRED DGTYVILYHS VFHKKCPPQK
301: GYVRACLKSG GYVISPIDNG KQSVVKHMLA VDWKSWRSYV KPSLARSITV KMLGRISALR ELFRAKHGSF PPNLSSGELS RSARLTQNED GVFGDSSLRE
401: NEMFKDTANE ERDKFPSERS SLVDLDEFFD VPEPSDNDNL DDSWTSDFDL DTCCQESRQP KLNSATSLVK KLHDLAVQKR GYVDLHERAK EESSPHATCN
501: PPCCYGTTLP TDPSCDLPCS WTTTDPSTFL IRGKTYLDDQ KKVKAKGTLM EMVAADWLKS DKREDDLGSR PGGIVQKYAA KGGPEFFFIV NIQVPGSTTY
601: SLVLYYMMST PIEEHPLLVS FVNGDDAYRN SRFKLIPYIS KGSWIVKQSV GKKACLIGQA LEINYFRGKN YIELGVDIGS STVARGVVSL VLGYLNKLVI
701: EMAFLIQANT EEELPEYLLG TCRFNHLDAS KAISIIP
Arabidopsis Description
Pleckstrin homology (PH) and lipid-binding START domains-containing protein [Source:UniProtKB/TrEMBL;Acc:F4IHT0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.