Factsheet for GSMUA_Achr11P16360_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os10t0479800-01	Rice	cytosol	17.14	80.0
GSMUA_Achr4P18250_001	Banana	mitochondrion	40.36	72.44
GSMUA_Achr2P00220_001	Banana	nucleus	74.46	61.14
GSMUA_Achr5P14640_001	Banana	cytosol, extracellular, mitochondrion, nucleus	70.54	53.67
Solyc06g075130.2.1	Tomato	nucleus	66.07	52.11
VIT_06s0004g02720.t01	Wine grape	cytosol	67.86	51.77
GSMUA_Achr1P08990_001	Banana	nucleus	64.29	51.65
Solyc11g069530.1.1	Tomato	cytosol	67.32	51.64
TraesCS1D01G155000.1	Wheat	nucleus	69.46	51.25
TraesCS1B01G173600.1	Wheat	nucleus	69.46	51.25
TraesCS1A01G156500.1	Wheat	nucleus	69.29	51.12
PGSC0003DMT400062486	Potato	nucleus	65.89	50.41
HORVU1Hr1G041740.29	Barley	extracellular, nucleus, plasma membrane	69.46	50.13
KRH22877	Soybean	plastid	65.89	50.0
EER91476	Sorghum	nucleus	68.21	49.93
KRH26439	Soybean	cytosol, extracellular, nucleus, plastid	65.54	49.86
CDY04553	Canola	cytosol	62.86	48.15
CDX71361	Canola	cytosol	62.68	47.89
Bra011959.1-P	Field mustard	cytosol	62.68	47.89
Zm00001d032685_P001	Maize	nucleus	65.36	47.72
AT2G28320.1	Thale cress	cytosol	61.96	47.08
GSMUA_Achr4P18260_001	Banana	mitochondrion	34.82	44.62
GSMUA_Achr5P21900_001	Banana	cytosol	17.14	29.0
GSMUA_Achr7P15920_001	Banana	cytosol	16.25	27.74
GSMUA_Achr5P04860_001	Banana	plastid	13.04	26.07
GSMUA_Achr5P17990_001	Banana	mitochondrion	32.32	24.86
GSMUA_Achr4P12370_001	Banana	mitochondrion	31.43	24.41
GSMUA_Achr11P...	Banana	mitochondrion	32.86	24.27
GSMUA_Achr4P05670_001	Banana	mitochondrion	30.89	23.8
GSMUA_Achr1P11490_001	Banana	plastid	15.0	21.05
GSMUA_Achr9P13170_001	Banana	nucleus	26.96	20.11

Protein Annotations

EnsemblPlants:GSMUA_Achr11P16360_001	EnsemblPlants:GSMUA_Achr11T16360_001	EnsemblPlantsGene:GSMUA_Achr11G16360_001	Gene3D:3.30.530.20	GO:GO:0003674	GO:GO:0005488
GO:GO:0008289	InterPro:EDR2_C	InterPro:IPR002913	InterPro:IPR023393	InterPro:START-like_dom_sf	InterPro:START_lipid-bd_dom
PANTHER:PTHR12136	PANTHER:PTHR12136:SF86	PFAM:PF01852	PFAM:PF07059	PFscan:PS50848	SUPFAM:SSF55961
UniParc:UPI000296AC45	UniProt:M0RSR6	MapMan:35.1	:	:	:

Description

DUF1336 domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr11G16360_001]

Coordinates

chr11:-:18060666..18066077

Molecular Weight (calculated)

63287.3 Da

IEP (calculated)

5.270

GRAVY (calculated)

-0.280

Length

560 amino acids

Sequence
(BLAST)

001: MHTDLMTFDV IAPSMWTIIG CKNGLRLFKE AKDVDFPNKN WEDHPAIMTV GVVDAASESI FHTVMSLGQS RSEWDFCLLE GNVIENLDDY TDIIHKKLRG
101: DWLPWGMKRR DLLLRRYWRK EDNGTYIILY HSVVHHKCQP EKGYVRAWLK SGGYEISPVN QGKQSIVKHM LAIDWKFWKL YIFTSSSMGI TTKMLERVAA
201: LREFFRAKLG HSAFSDFSSD VDENNKIESF AKEIQMSSPK HAGNGSLRQL NDAADEFFDV LTEAEYDQTE FWPADENMQT QLVQDQCQGE LSTTAVFIEK
301: LHDVSVQKSG SADFEESHTG DSMSCNYGTT LPKDPNCSVV CSWATADPST FLIRGESYLH DHQKVKASET LMQMVAADWL KSDKREDDLG GRPDGIVQKY
401: AAQGGSKFFF IVNMQVPGST TYSLALYYMM DMPLEDVPLL ESFVKGNDAY RNSRFKLIPY ISKGSWLVKQ SVGQKACLVG QALDINYFRG SNYLEVAIDV
501: GSSTVARSVV SLVIGYLNSL VIEMAFLMQG DKQEELPEFL LGTCRLNQLD IAKAVPINPS

Best Arabidopsis Sequence Match ( AT2G28320.1 )
(BLAST)

001: MAFGSENESE TKMEGWLYII RSNRFGLHFS RKRYFVLGDH LLKSFKSISD SKTKNAGRSA VIDSCIRVTD NGRENVHRKA FFIFTLYNTS NHNDQLKLGA
101: SSPEDAARWI NLIKEAALKG APFPGDVFNC SRSRWDSLRL SSSVRDHHSN SIDWTLRSSA RVDPVTTDVV APSPWTIFGC QNGLRLFKEA KERDSLGRWD
201: DHPAIMAVGV VDGTSETIFQ TLLSLGPSRS EWDFCFYQGS VVEHLDGHTD IIHKQLYSDW LPWGMKRRDF SLRRYWRRED DGTYVILYHS VFHKKCPPQK
301: GYVRACLKSG GYVISPIDNG KQSVVKHMLA VDWKSWRSYV KPSLARSITV KMLGRISALR ELFRAKHGSF PPNLSSGELS RSARLTQNED GVFGDSSLRE
401: NEMFKDTANE ERDKFPSERS SLVDLDEFFD VPEPSDNDNL DDSWTSDFDL DTCCQESRQP KLNSATSLVK KLHDLAVQKR GYVDLHERAK EESSPHATCN
501: PPCCYGTTLP TDPSCDLPCS WTTTDPSTFL IRGKTYLDDQ KKVKAKGTLM EMVAADWLKS DKREDDLGSR PGGIVQKYAA KGGPEFFFIV NIQVPGSTTY
601: SLVLYYMMST PIEEHPLLVS FVNGDDAYRN SRFKLIPYIS KGSWIVKQSV GKKACLIGQA LEINYFRGKN YIELGVDIGS STVARGVVSL VLGYLNKLVI
701: EMAFLIQANT EEELPEYLLG TCRFNHLDAS KAISIIP

Arabidopsis Description

Pleckstrin homology (PH) and lipid-binding START domains-containing protein [Source:UniProtKB/TrEMBL;Acc:F4IHT0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.