Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- plastid 3
- mitochondrion 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
GSMUA_Achr7P15920_001 | Banana | cytosol | 75.0 | 64.02 |
GSMUA_Achr5P21900_001 | Banana | cytosol | 74.64 | 63.14 |
VIT_04s0008g07260.t01 | Wine grape | cytosol, nucleus, plastid | 65.0 | 59.67 |
KRH52302 | Soybean | cytosol | 57.14 | 55.36 |
KRH15692 | Soybean | cytosol | 57.86 | 54.36 |
Bra006077.1-P | Field mustard | cytosol, mitochondrion, nucleus, plastid | 57.86 | 53.47 |
CDX70368 | Canola | cytosol, mitochondrion, nucleus, plastid | 57.86 | 53.47 |
PGSC0003DMT400067616 | Potato | cytosol | 55.36 | 53.45 |
KRH61636 | Soybean | cytosol | 56.43 | 53.2 |
CDX78399 | Canola | nucleus, plastid | 57.5 | 53.14 |
AT5G10750.1 | Thale cress | cytosol, mitochondrion, nucleus, plastid | 56.07 | 51.99 |
Zm00001d014641_P001 | Maize | cytosol, extracellular, nucleus | 59.64 | 51.38 |
OQU76985 | Sorghum | cytosol, extracellular, nucleus | 59.29 | 51.08 |
Zm00001d036506_P001 | Maize | extracellular, nucleus, plastid | 58.21 | 49.85 |
Solyc08g068880.1.1 | Tomato | mitochondrion | 56.07 | 49.84 |
PGSC0003DMT400038272 | Potato | mitochondrion | 55.36 | 49.21 |
TraesCS7A01G424300.1 | Wheat | cytosol | 56.07 | 49.06 |
TraesCS7B01G325500.1 | Wheat | cytosol | 56.07 | 48.76 |
TraesCS7D01G417100.2 | Wheat | cytosol, mitochondrion, nucleus | 55.71 | 48.6 |
Solyc08g006590.1.1 | Tomato | cytosol | 48.21 | 48.56 |
KRH05337 | Soybean | cytosol | 44.29 | 45.76 |
Bra036529.1-P | Field mustard | cytosol | 46.07 | 45.26 |
HORVU7Hr1G098100.1 | Barley | plastid | 56.07 | 44.35 |
CDX80479 | Canola | cytoskeleton, cytosol, nucleus | 45.36 | 43.34 |
Bra009809.1-P | Field mustard | cytosol | 42.86 | 42.55 |
Bra009807.1-P | Field mustard | cytosol | 44.29 | 42.32 |
CDX88150 | Canola | cytosol | 42.5 | 42.2 |
AT5G25010.1 | Thale cress | cytosol | 42.14 | 41.26 |
CDX88148 | Canola | cytosol | 38.57 | 40.91 |
AT5G25020.1 | Thale cress | cytosol | 38.57 | 40.15 |
AT5G24990.1 | Thale cress | cytosol | 42.14 | 40.14 |
CDX80480 | Canola | cytosol | 28.93 | 39.51 |
CDY05382 | Canola | cytosol | 37.5 | 39.03 |
GSMUA_Achr1P11490_001 | Banana | plastid | 36.07 | 25.31 |
GSMUA_Achr4P18250_001 | Banana | mitochondrion | 24.29 | 21.79 |
GSMUA_Achr11P... | Banana | cytosol | 26.07 | 13.04 |
GSMUA_Achr5P17990_001 | Banana | mitochondrion | 32.14 | 12.36 |
GSMUA_Achr4P12370_001 | Banana | mitochondrion | 31.43 | 12.21 |
GSMUA_Achr11P... | Banana | mitochondrion | 32.5 | 12.01 |
GSMUA_Achr4P05670_001 | Banana | mitochondrion | 31.07 | 11.97 |
GSMUA_Achr9P13170_001 | Banana | nucleus | 31.43 | 11.72 |
GSMUA_Achr1P08990_001 | Banana | nucleus | 27.86 | 11.19 |
GSMUA_Achr2P00220_001 | Banana | nucleus | 26.43 | 10.85 |
GSMUA_Achr5P14640_001 | Banana | cytosol, extracellular, mitochondrion, nucleus | 26.07 | 9.92 |
GSMUA_Achr4P18260_001 | Banana | mitochondrion | 2.5 | 1.6 |
Protein Annotations
EnsemblPlants:GSMUA_Achr5P04860_001 | EnsemblPlants:GSMUA_Achr5T04860_001 | EnsemblPlantsGene:GSMUA_Achr5G04860_001 | InterPro:EDR2_C | PANTHER:PTHR12136 | PANTHER:PTHR12136:SF38 |
PFAM:PF07059 | SEG:seg | UniParc:UPI00029624B1 | UniProt:M0SVR5 | MapMan:35.1 | : |
Description
EDR2, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr5G04860_001]
Coordinates
chr5:-:3564018..3564953
Molecular Weight (calculated)
30753.2 Da
IEP (calculated)
9.113
GRAVY (calculated)
-0.440
Length
280 amino acids
Sequence
(BLAST)
(BLAST)
001: MCPKPTNSGA AGSPADGKKP YDWRQEVIDS GSLRRVDLHT GSNGWASPPG DLFALRGRQY FSHRQKAPSG DWLLNPAGVD WLRSPSRLDN VLGRSDNRVA
101: AALRRARALG RAQKTFLFAV NLQVPGGREC HSAVFYFAAE DTIPPGSLFY RFVHGDDEFR NARFKIVNRI NYLEIDVDIE SSSIAKAILR LALGYVTAVT
201: IDMGFLVEAQ AEEELPERLL GAVRVVQMEM GSATYVDTRT KAAESTRGSG FRGLAKVNHH HHQSTHSGCG GNARSREDEG
101: AALRRARALG RAQKTFLFAV NLQVPGGREC HSAVFYFAAE DTIPPGSLFY RFVHGDDEFR NARFKIVNRI NYLEIDVDIE SSSIAKAILR LALGYVTAVT
201: IDMGFLVEAQ AEEELPERLL GAVRVVQMEM GSATYVDTRT KAAESTRGSG FRGLAKVNHH HHQSTHSGCG GNARSREDEG
001: MSPSKQRHRS STGENKSKPV RSASSSAIPE WITESTNGGS LRRVDPDTGT DGWASPPGDV FSLRSDSYLS KKQKTPAGDY LLSPAGMDWL KSSTKLENAL
101: ARPDNRVAHA LRKAQSRGQS LKSFIFAVNL QIPGKDHHSA VFYFATEEPI PSGSLLHRFI NGDDAFRNQR FKIVNRIVKG PWVVKAAVGN YSACLLGKAL
201: TCNYHRGPNY FEIDVDISSS AIATAILRLA LGYVTSVTID MGFLAEAQTE EELPERLIGA VRVCQMEMSS AFVVDAPPPQ QLPSQPCRTL SSAKVNHDED
301: ED
101: ARPDNRVAHA LRKAQSRGQS LKSFIFAVNL QIPGKDHHSA VFYFATEEPI PSGSLLHRFI NGDDAFRNQR FKIVNRIVKG PWVVKAAVGN YSACLLGKAL
201: TCNYHRGPNY FEIDVDISSS AIATAILRLA LGYVTSVTID MGFLAEAQTE EELPERLIGA VRVCQMEMSS AFVVDAPPPQ QLPSQPCRTL SSAKVNHDED
301: ED
Arabidopsis Description
At5g10750 [Source:UniProtKB/TrEMBL;Acc:Q9LEW4]
SUBAcon: [mitochondrion,plastid,nucleus,cytosol]
SUBAcon: [mitochondrion,plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.