Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH52302 | Soybean | cytosol | 88.89 | 91.35 |
| CDX70368 | Canola | cytosol, mitochondrion, nucleus, plastid | 71.04 | 69.64 |
| CDX78399 | Canola | nucleus, plastid | 70.71 | 69.31 |
| Bra006077.1-P | Field mustard | cytosol, mitochondrion, nucleus, plastid | 70.37 | 68.98 |
| AT5G10750.1 | Thale cress | cytosol, mitochondrion, nucleus, plastid | 70.03 | 68.87 |
| KRH15692 | Soybean | cytosol | 66.67 | 66.44 |
| VIT_04s0008g07260.t01 | Wine grape | cytosol, nucleus, plastid | 67.0 | 65.25 |
| PGSC0003DMT400067616 | Potato | cytosol | 58.92 | 60.34 |
| Bra036529.1-P | Field mustard | cytosol | 56.57 | 58.95 |
| GSMUA_Achr7P15920_001 | Banana | cytosol | 63.97 | 57.93 |
| GSMUA_Achr5P21900_001 | Banana | cytosol | 64.31 | 57.7 |
| Solyc08g068880.1.1 | Tomato | mitochondrion | 60.61 | 57.14 |
| KRH05337 | Soybean | cytosol | 51.85 | 56.83 |
| PGSC0003DMT400038272 | Potato | mitochondrion | 60.27 | 56.83 |
| GSMUA_Achr5P04860_001 | Banana | plastid | 53.2 | 56.43 |
| Solyc08g006590.1.1 | Tomato | cytosol | 51.18 | 54.68 |
| CDX80479 | Canola | cytoskeleton, cytosol, nucleus | 52.53 | 53.24 |
| Bra009809.1-P | Field mustard | cytosol | 50.17 | 52.84 |
| CDY05382 | Canola | cytosol | 47.81 | 52.79 |
| CDX88150 | Canola | cytosol | 49.83 | 52.48 |
| Bra009807.1-P | Field mustard | cytosol | 51.52 | 52.22 |
| AT5G25010.1 | Thale cress | cytosol | 50.17 | 52.1 |
| Zm00001d014641_P001 | Maize | cytosol, extracellular, nucleus | 56.9 | 52.0 |
| AT5G25020.1 | Thale cress | cytosol | 46.8 | 51.67 |
| CDX88148 | Canola | cytosol | 45.45 | 51.14 |
| OQU76985 | Sorghum | cytosol, extracellular, nucleus | 55.89 | 51.08 |
| AT5G24990.1 | Thale cress | cytosol | 50.51 | 51.02 |
| TraesCS7A01G424300.1 | Wheat | cytosol | 54.21 | 50.31 |
| CDX80480 | Canola | cytosol | 34.68 | 50.24 |
| TraesCS7D01G417100.2 | Wheat | cytosol, mitochondrion, nucleus | 54.21 | 50.16 |
| TraesCS7B01G325500.1 | Wheat | cytosol | 54.21 | 50.0 |
| Zm00001d036506_P001 | Maize | extracellular, nucleus, plastid | 54.88 | 49.85 |
| KRG90499 | Soybean | extracellular | 11.45 | 46.58 |
| HORVU7Hr1G098100.1 | Barley | plastid | 53.87 | 45.2 |
| KRH24608 | Soybean | cytosol | 39.39 | 37.74 |
| KRH10121 | Soybean | endoplasmic reticulum, golgi | 39.06 | 33.05 |
| KRH23216 | Soybean | cytosol | 24.58 | 33.03 |
| KRH29613 | Soybean | cytosol | 32.32 | 32.43 |
| KRH39650 | Soybean | mitochondrion | 38.72 | 15.84 |
| KRH76356 | Soybean | mitochondrion | 38.72 | 15.82 |
| KRH34863 | Soybean | cytosol, mitochondrion, nucleus, plastid | 33.67 | 13.87 |
| KRH12970 | Soybean | cytosol | 34.01 | 13.8 |
| KRH20109 | Soybean | cytosol, nucleus | 34.34 | 13.65 |
| KRH03545 | Soybean | nucleus | 34.01 | 13.59 |
| KRH08525 | Soybean | cytosol | 31.65 | 13.02 |
| KRH26439 | Soybean | cytosol, extracellular, nucleus, plastid | 31.65 | 12.77 |
| KRH22877 | Soybean | plastid | 31.31 | 12.6 |
Protein Annotations
| EMBL:ACUP02002179 | EnsemblPlants:KRH61636 | EnsemblPlantsGene:GLYMA_04G059500 | EntrezGene:100800245 | InterPro:EDR2_C | PANTHER:PTHR12136 |
| PANTHER:PTHR12136:SF38 | PFAM:PF07059 | ProteinID:KRH61636 | ProteinID:KRH61636.1 | SEG:seg | UniParc:UPI0006EDB92D |
| UniProt:A0A0R0KCH5 | MapMan:35.1 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr4:+:4870922..4873263
Molecular Weight (calculated)
32638.1 Da
IEP (calculated)
9.539
GRAVY (calculated)
-0.233
Length
297 amino acids
Sequence
(BLAST)
(BLAST)
001: MTDDRVHPIP NLAMSPATAH WTSDAIHGGP LRRVDLDSGT NGWASPPGDL FLLRSPNYFT KRQKSPAGDY LLSPSGMDWL KSQSKLDNVL SRPDNRMAQA
101: LRQAQAQGKS LKSFIFAVNL QVPGKEHHSA VFYFSTDEPI TSGSLLSRFI EGDDAFRNQR FKLVNRIVKG PWIVKKAVGN YSACLLGKAL TCNYHRGPNY
201: FEIDVDIGSS AIANAILRLA LGYVTSVTID MGFVVEAQSE EELPERLIGA VRVCQMEMSA ATVVDAPNAP RGNKVNHLSE NWKWGRAKKV VGIISAL
101: LRQAQAQGKS LKSFIFAVNL QVPGKEHHSA VFYFSTDEPI TSGSLLSRFI EGDDAFRNQR FKLVNRIVKG PWIVKKAVGN YSACLLGKAL TCNYHRGPNY
201: FEIDVDIGSS AIANAILRLA LGYVTSVTID MGFVVEAQSE EELPERLIGA VRVCQMEMSA ATVVDAPNAP RGNKVNHLSE NWKWGRAKKV VGIISAL
001: MSPSKQRHRS STGENKSKPV RSASSSAIPE WITESTNGGS LRRVDPDTGT DGWASPPGDV FSLRSDSYLS KKQKTPAGDY LLSPAGMDWL KSSTKLENAL
101: ARPDNRVAHA LRKAQSRGQS LKSFIFAVNL QIPGKDHHSA VFYFATEEPI PSGSLLHRFI NGDDAFRNQR FKIVNRIVKG PWVVKAAVGN YSACLLGKAL
201: TCNYHRGPNY FEIDVDISSS AIATAILRLA LGYVTSVTID MGFLAEAQTE EELPERLIGA VRVCQMEMSS AFVVDAPPPQ QLPSQPCRTL SSAKVNHDED
301: ED
101: ARPDNRVAHA LRKAQSRGQS LKSFIFAVNL QIPGKDHHSA VFYFATEEPI PSGSLLHRFI NGDDAFRNQR FKIVNRIVKG PWVVKAAVGN YSACLLGKAL
201: TCNYHRGPNY FEIDVDISSS AIATAILRLA LGYVTSVTID MGFLAEAQTE EELPERLIGA VRVCQMEMSS AFVVDAPPPQ QLPSQPCRTL SSAKVNHDED
301: ED
Arabidopsis Description
At5g10750 [Source:UniProtKB/TrEMBL;Acc:Q9LEW4]
SUBAcon: [mitochondrion,plastid,nucleus,cytosol]
SUBAcon: [mitochondrion,plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.