CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, nucleus, cytosol

Predictor Summary:

plastid 3
nucleus 2
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH08525	Soybean	cytosol	66.71	66.62
KRH22877	Soybean	plastid	62.97	61.52
KRH26439	Soybean	cytosol, extracellular, nucleus, plastid	62.41	61.14
GSMUA_Achr4P18260_001	Banana	mitochondrion	33.98	56.06
KRG90499	Soybean	extracellular	5.41	53.42
KRH52302	Soybean	cytosol	13.87	34.6
KRH61636	Soybean	cytosol	13.87	33.67
KRH15692	Soybean	cytosol	13.87	33.56
KRH76356	Soybean	mitochondrion	31.62	31.36
KRH39650	Soybean	mitochondrion	31.48	31.27
KRH05337	Soybean	cytosol	10.68	28.41
KRH24608	Soybean	cytosol	11.51	26.77
KRH12970	Soybean	cytosol	27.05	26.64
KRH20109	Soybean	cytosol, nucleus	27.46	26.51
KRH03545	Soybean	nucleus	26.91	26.11
KRH10121	Soybean	endoplasmic reticulum, golgi	12.62	25.93
KRH23216	Soybean	cytosol	7.91	25.79
KRH29613	Soybean	cytosol	9.57	23.31

Protein Annotations

EntrezGene:100802528	Gene3D:2.30.29.30	Gene3D:3.30.530.20	MapMan:35.1	EMBL:ACUP02006639	InterPro:EDR2_C
EnsemblPlantsGene:GLYMA_10G210400	GO:GO:0003674	GO:GO:0005488	GO:GO:0008289	UniProt:I1LD05	InterPro:IPR001849
InterPro:IPR002913	InterPro:IPR011993	InterPro:IPR023393	EnsemblPlants:KRH34863	ProteinID:KRH34863	ProteinID:KRH34863.1
PFAM:PF00169	PFAM:PF01852	PFAM:PF07059	InterPro:PH-like_dom_sf	InterPro:PH_domain	PFscan:PS50003
PFscan:PS50848	PANTHER:PTHR12136	PANTHER:PTHR12136:SF86	SMART:SM00233	SMART:SM00234	SUPFAM:SSF50729
SUPFAM:SSF55961	InterPro:START-like_dom_sf	InterPro:START_lipid-bd_dom	UniParc:UPI000295DE48	:	:

Description

hypothetical protein

Coordinates

chr10:+:44241832..44248014

Molecular Weight (calculated)

81327.4 Da

IEP (calculated)

8.225

GRAVY (calculated)

-0.352

Length

721 amino acids

Sequence
(BLAST)

001: MEGWLYLIRA NRFGQHYSRK RYFILKGNAL RSFKIKPTSQ MEEPIRSAII DSCIRVNDNG RETMNKNVLF IFTVYNATDQ SDKLKLGASS SEEAARWIRT
101: LQDAAMKGCP SPAKNLVACH KKRRSSLRNG GSKSTDWKYS NLNFQSCIYT EAMTADVIAP SPWKIFGCQN GLRMFKEAKD WDSRGSHWVG ENPAIMAVGV
201: VDGASEAIFH TLMTLDPSRS EWDFCIYRGN VVDHIDGHTD IIHLQLYNDW LPWGMKPRDL LLRRYWRRED DGSYVLLFHS VYHSKCPPKK GYVRACVKSG
301: GFVVTPVNKG TQSVVRHMLA VDWKFWKLYL RPASARSITI RMLERIAALR ELFRTKGGNY SSEPLAMTKD IGLPLGVKED IKTEVSQEKN KFEEPPLVVM
401: EDEVEPSGRR SLMGLNDSDE FFDVPEPTEY DHFQNEWHAD LSSEQMSMSI PRMTSAAGFV KKLHGLAVQK KGYMDLQEAA MEESTSCSYG ATLQKDSSCA
501: SPCTWAASDP SLFLVRGENY LQDHQKVKAN GTLTQMVGAD WLRSDTREDN LSSRPGSIVQ QYAAKGGPEF FFVINMQMPG SPMYSLALYY MLKTPLEDNP
601: LLQSFVDGDD AYRNSRFKLI PYISKGSWIV KQSVGKKACL VGQALEMLYI RGKNYLEIDI DVGSSTVARG VASLVLGYLN NLVVEMAFLV QGSTPDELPE
701: VLLGTCRLNH MDASKAFLVN S

Best Arabidopsis Sequence Match ( AT3G54800.1 )
(BLAST)

001: MGVSQTDGRM EGWLYTIRHN RFGLQFSRKR YFVLHENNLT SFKSVPSDHN EEPERRASLD CCIRVTDNGR ESFHRKILFI FTLYNTSNHL DQLKLGASSP
101: EEAAKWIRSL QDASQKGFPI PDCEFFVSHA EKGLVKLDVS KRNRRKNSVD WTNYSSTNYS STSLNVETNV APDVIAPSPW KIFGCQNGLR LFKEAKDWDS
201: RGRHWDDHPA IMAVGVIDGT SEDIFNTLMS LGPLRSEWDF CFYKGNVVEH LDGHTDIIHL QLYSDWLPWG MNRRDLLLRR YWRREDDGTY VILCHSVYHK
301: NCPPKKGYVR ACVKSGGYVV TPANNGKQSL VKHMVAIDWR SWNLYMRPSS ARSITIRVVE RVAALREMFK AKQGHGFTEF VSGEFLDTKP CLSKINTMPL
401: KTEAKEVDLE TMHAEEMDKP TSARNSLMDL NDASDEFFDV PEPNESTEFD SFIDSSPYSQ GHQLKIPTPA GIVKKLQDLA INKKGYMDLQ EVGLEENNTF
501: FYGATLQKDP SLTLPCSWST ADPSTFLIRG NNYLKNQQKV KAKGTLMQMI GADWISSDKR EDDLGGRIGG LVQEYAAKGS PEFFFIVNIQ VPGSAMYSLA
601: LYYMLKTPLE EHPLLESFVN GDDAYRNSRF KLIPHISKGS WIVKQSVGKK ACLVGQVLEV CYTRGKNYLE LDIDVGSSTV ARGVTNLVLG YLNNLVIEMA
701: FLIQANTVEE LPELLLGTCR LNYLDVSKSV KER

Arabidopsis Description

AT3G54800 protein [Source:UniProtKB/TrEMBL;Acc:B9DGX7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.