Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH15692 | Soybean | cytosol | 74.17 | 67.45 |
| KRH52302 | Soybean | cytosol | 57.56 | 53.98 |
| KRH61636 | Soybean | cytosol | 56.83 | 51.85 |
| VIT_04s0008g07260.t01 | Wine grape | cytosol, nucleus, plastid | 57.2 | 50.82 |
| Bra006077.1-P | Field mustard | cytosol, mitochondrion, nucleus, plastid | 56.46 | 50.49 |
| CDX70368 | Canola | cytosol, mitochondrion, nucleus, plastid | 56.46 | 50.49 |
| CDX78399 | Canola | nucleus, plastid | 56.09 | 50.16 |
| AT5G10750.1 | Thale cress | cytosol, mitochondrion, nucleus, plastid | 55.72 | 50.0 |
| PGSC0003DMT400067616 | Potato | cytosol | 51.29 | 47.93 |
| Solyc08g006590.1.1 | Tomato | cytosol | 46.49 | 45.32 |
| GSMUA_Achr7P15920_001 | Banana | cytosol | 53.87 | 44.51 |
| GSMUA_Achr5P04860_001 | Banana | plastid | 45.76 | 44.29 |
| GSMUA_Achr5P21900_001 | Banana | cytosol | 53.87 | 44.11 |
| Solyc08g068880.1.1 | Tomato | mitochondrion | 50.92 | 43.81 |
| PGSC0003DMT400038272 | Potato | mitochondrion | 50.18 | 43.17 |
| Bra036529.1-P | Field mustard | cytosol | 45.02 | 42.81 |
| AT5G25010.1 | Thale cress | cytosol | 44.28 | 41.96 |
| CDX80479 | Canola | cytoskeleton, cytosol, nucleus | 45.02 | 41.64 |
| AT5G25020.1 | Thale cress | cytosol | 40.96 | 41.26 |
| Bra009809.1-P | Field mustard | cytosol | 42.8 | 41.13 |
| KRG90499 | Soybean | extracellular | 11.07 | 41.1 |
| Bra009807.1-P | Field mustard | cytosol | 44.28 | 40.96 |
| AT5G24990.1 | Thale cress | cytosol | 44.28 | 40.82 |
| CDX88150 | Canola | cytosol | 42.44 | 40.78 |
| CDX88148 | Canola | cytosol | 38.75 | 39.77 |
| CDY05382 | Canola | cytosol | 39.11 | 39.41 |
| CDX80480 | Canola | cytosol | 29.15 | 38.54 |
| Zm00001d014641_P001 | Maize | cytosol, extracellular, nucleus | 46.13 | 38.46 |
| OQU76985 | Sorghum | cytosol, extracellular, nucleus | 45.39 | 37.85 |
| TraesCS7A01G424300.1 | Wheat | cytosol | 43.54 | 36.88 |
| TraesCS7D01G417100.2 | Wheat | cytosol, mitochondrion, nucleus | 43.54 | 36.76 |
| Zm00001d036506_P001 | Maize | extracellular, nucleus, plastid | 43.91 | 36.39 |
| TraesCS7B01G325500.1 | Wheat | cytosol | 43.17 | 36.34 |
| HORVU7Hr1G098100.1 | Barley | plastid | 43.91 | 33.62 |
| KRH24608 | Soybean | cytosol | 33.21 | 29.03 |
| KRH23216 | Soybean | cytosol | 23.25 | 28.51 |
| KRH10121 | Soybean | endoplasmic reticulum, golgi | 32.47 | 25.07 |
| KRH29613 | Soybean | cytosol | 26.57 | 24.32 |
| KRH39650 | Soybean | mitochondrion | 33.95 | 12.67 |
| KRH76356 | Soybean | mitochondrion | 33.95 | 12.65 |
| KRH12970 | Soybean | cytosol | 30.63 | 11.34 |
| KRH34863 | Soybean | cytosol, mitochondrion, nucleus, plastid | 28.41 | 10.68 |
| KRH20109 | Soybean | cytosol, nucleus | 29.15 | 10.58 |
| KRH03545 | Soybean | nucleus | 28.78 | 10.5 |
| KRH08525 | Soybean | cytosol | 27.68 | 10.39 |
| KRH22877 | Soybean | plastid | 26.2 | 9.62 |
| KRH26439 | Soybean | cytosol, extracellular, nucleus, plastid | 25.83 | 9.51 |
Protein Annotations
| EMBL:ACUP02010727 | EnsemblPlants:KRH05337 | EnsemblPlantsGene:GLYMA_17G221300 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0008289 |
| InterPro:EDR2_C | PANTHER:PTHR12136 | PANTHER:PTHR12136:SF88 | PFAM:PF07059 | ProteinID:KRH05337 | ProteinID:KRH05337.1 |
| SEG:seg | UniParc:UPI0006ED7C38 | UniProt:A0A0R0FQE3 | MapMan:35.1 | : | : |
Description
hypothetical protein
Coordinates
chr17:+:37392750..37393625
Molecular Weight (calculated)
30334.6 Da
IEP (calculated)
7.971
GRAVY (calculated)
-0.114
Length
271 amino acids
Sequence
(BLAST)
(BLAST)
001: MLPPSSNPRR SLGNAVESSF LDWISDSING GSLRCVDLNS GTNGWVSPPG SNRQKCPAED YLLLLLKSTT KLDHVLSRAH NNVMHALRRS QSQTLGRSLK
101: SFVFTISDRK DHHSAVFYFA IDAPDPLRTS SLLNRFVHGN DVFRNQRFKL VNWIEKGPWI VKKAMGSHSA CLLGKVLNCI YYKGSNYLKI DVDIEILHLV
201: LGYVTTVMID MGFVVEAQAE EELLEWLIDA IRVCHMEMAL ATVIESPHVP RGIGLAKVNH HKSTDELALN D
101: SFVFTISDRK DHHSAVFYFA IDAPDPLRTS SLLNRFVHGN DVFRNQRFKL VNWIEKGPWI VKKAMGSHSA CLLGKVLNCI YYKGSNYLKI DVDIEILHLV
201: LGYVTTVMID MGFVVEAQAE EELLEWLIDA IRVCHMEMAL ATVIESPHVP RGIGLAKVNH HKSTDELALN D
001: MSPSKQRHRS STGENKSKPV RSASSSAIPE WITESTNGGS LRRVDPDTGT DGWASPPGDV FSLRSDSYLS KKQKTPAGDY LLSPAGMDWL KSSTKLENAL
101: ARPDNRVAHA LRKAQSRGQS LKSFIFAVNL QIPGKDHHSA VFYFATEEPI PSGSLLHRFI NGDDAFRNQR FKIVNRIVKG PWVVKAAVGN YSACLLGKAL
201: TCNYHRGPNY FEIDVDISSS AIATAILRLA LGYVTSVTID MGFLAEAQTE EELPERLIGA VRVCQMEMSS AFVVDAPPPQ QLPSQPCRTL SSAKVNHDED
301: ED
101: ARPDNRVAHA LRKAQSRGQS LKSFIFAVNL QIPGKDHHSA VFYFATEEPI PSGSLLHRFI NGDDAFRNQR FKIVNRIVKG PWVVKAAVGN YSACLLGKAL
201: TCNYHRGPNY FEIDVDISSS AIATAILRLA LGYVTSVTID MGFLAEAQTE EELPERLIGA VRVCQMEMSS AFVVDAPPPQ QLPSQPCRTL SSAKVNHDED
301: ED
Arabidopsis Description
At5g10750 [Source:UniProtKB/TrEMBL;Acc:Q9LEW4]
SUBAcon: [mitochondrion,plastid,nucleus,cytosol]
SUBAcon: [mitochondrion,plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.