Factsheet for Solyc08g006590.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 4
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400067616	Potato	cytosol	82.73	79.31
Solyc08g068880.1.1	Tomato	mitochondrion	72.3	63.81
VIT_04s0008g07260.t01	Wine grape	cytosol, nucleus, plastid	59.71	54.43
KRH52302	Soybean	cytosol	55.4	53.29
KRH15692	Soybean	cytosol	56.47	52.68
Bra006077.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	57.19	52.48
CDX70368	Canola	cytosol, mitochondrion, nucleus, plastid	57.19	52.48
CDX78399	Canola	nucleus, plastid	56.83	52.15
AT5G10750.1	Thale cress	cytosol, mitochondrion, nucleus, plastid	56.12	51.66
KRH61636	Soybean	cytosol	54.68	51.18
GSMUA_Achr5P21900_001	Banana	cytosol	58.99	49.55
GSMUA_Achr5P04860_001	Banana	plastid	48.56	48.21
GSMUA_Achr7P15920_001	Banana	cytosol	56.83	48.17
KRH05337	Soybean	cytosol	45.32	46.49
Zm00001d014641_P001	Maize	cytosol, extracellular, nucleus	53.96	46.15
TraesCS7A01G424300.1	Wheat	cytosol	52.88	45.94
TraesCS7B01G325500.1	Wheat	cytosol	52.88	45.65
TraesCS7D01G417100.2	Wheat	cytosol, mitochondrion, nucleus	52.52	45.48
OQU76985	Sorghum	cytosol, extracellular, nucleus	52.88	45.23
Zm00001d036506_P001	Maize	extracellular, nucleus, plastid	52.52	44.65
CDX80480	Canola	cytosol	32.73	44.39
AT5G24990.1	Thale cress	cytosol	44.96	42.52
Bra036529.1-P	Field mustard	cytosol	43.53	42.46
HORVU7Hr1G098100.1	Barley	plastid	53.6	42.09
AT5G25010.1	Thale cress	cytosol	42.81	41.61
Bra009809.1-P	Field mustard	cytosol	41.73	41.13
AT5G25020.1	Thale cress	cytosol	39.57	40.89
CDX88150	Canola	cytosol	41.37	40.78
Bra009807.1-P	Field mustard	cytosol	42.81	40.61
CDX80479	Canola	cytoskeleton, cytosol, nucleus	42.81	40.61
CDX88148	Canola	cytosol	37.05	39.02
CDY05382	Canola	cytosol	36.33	37.55
Solyc06g053360.2.1	Tomato	cytosol	28.78	26.23
Solyc08g005410.2.1	Tomato	cytosol	37.77	14.81
Solyc04g025280.2.1	Tomato	cytosol	30.58	14.55
Solyc12g096050.1.1	Tomato	mitochondrion	36.69	14.09
Solyc07g005000.2.1	Tomato	cytosol	36.33	13.41
Solyc06g075130.2.1	Tomato	nucleus	32.73	12.82
Solyc11g069530.1.1	Tomato	cytosol	32.37	12.33

Protein Annotations

EnsemblPlants:Solyc08g006590.1.1	EnsemblPlantsGene:Solyc08g006590.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0008289	InterPro:EDR2_C
PANTHER:PTHR12136	PANTHER:PTHR12136:SF38	PFAM:PF07059	UniParc:UPI000276C04C	UniProt:K4CIE7	MapMan:35.1

Description

No Description!

Coordinates

chr8:-:1184285..1187021

Molecular Weight (calculated)

31122.1 Da

IEP (calculated)

9.697

GRAVY (calculated)

-0.454

Length

278 amino acids

Sequence
(BLAST)

001: MTINSIATEP GEAPPSLHRR INSSYFHRKM CSAKQKEKEK LNQHRSKGGG RDWREEVISG GSLKCVDLNK GTNGWASPPG DNFNLRGTNY FTKKTKIPSG
101: EWLLQPAGVD WLRSNSKLDH VLSRNDNRVM NALKKSHSQG EFLKTFVLAV NLQIPGRDQH SAVFYFATEQ NRPLEPGSLL YRFVHGDDSY RNSRFKIVNR
201: MIKGPWIVKT AVGNYSACLL GKALNCYYHK GPNYLEIDVD IGSSAIATAI LHLALGYVTS VSIDMGFLVE AETAEEFL

Best Arabidopsis Sequence Match ( AT5G10750.1 )
(BLAST)

001: MSPSKQRHRS STGENKSKPV RSASSSAIPE WITESTNGGS LRRVDPDTGT DGWASPPGDV FSLRSDSYLS KKQKTPAGDY LLSPAGMDWL KSSTKLENAL
101: ARPDNRVAHA LRKAQSRGQS LKSFIFAVNL QIPGKDHHSA VFYFATEEPI PSGSLLHRFI NGDDAFRNQR FKIVNRIVKG PWVVKAAVGN YSACLLGKAL
201: TCNYHRGPNY FEIDVDISSS AIATAILRLA LGYVTSVTID MGFLAEAQTE EELPERLIGA VRVCQMEMSS AFVVDAPPPQ QLPSQPCRTL SSAKVNHDED
301: ED

Arabidopsis Description

At5g10750 [Source:UniProtKB/TrEMBL;Acc:Q9LEW4]
SUBAcon: [mitochondrion,plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.