Factsheet for GSMUA_Achr4P05670_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
mitochondrion 5
cytosol 1
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P12370_001	Banana	mitochondrion	74.83	75.45
GSMUA_Achr5P17990_001	Banana	mitochondrion	66.85	66.76
GSMUA_Achr11P...	Banana	mitochondrion	65.75	63.06
VIT_15s0107g00440.t01	Wine grape	cytosol	23.38	49.85
Os10t0455900-01	Rice	plasma membrane	21.18	48.89
GSMUA_Achr4P18250_001	Banana	mitochondrion	15.82	36.86
GSMUA_Achr5P21900_001	Banana	cytosol	15.41	33.84
GSMUA_Achr7P15920_001	Banana	cytosol	14.99	33.23
GSMUA_Achr2P00220_001	Banana	nucleus	29.16	31.09
GSMUA_Achr5P04860_001	Banana	plastid	11.97	31.07
GSMUA_Achr11P...	Banana	cytosol	23.8	30.89
GSMUA_Achr1P08990_001	Banana	nucleus	29.44	30.7
GSMUA_Achr5P14640_001	Banana	cytosol, extracellular, mitochondrion, nucleus	29.71	29.35
GSMUA_Achr9P13170_001	Banana	nucleus	27.79	26.9
GSMUA_Achr1P11490_001	Banana	plastid	14.58	26.57
GSMUA_Achr4P18260_001	Banana	mitochondrion	15.82	26.32

Protein Annotations

Gene3D:2.30.29.30	Gene3D:3.30.530.20	MapMan:35.1	ncoils:Coil	InterPro:EDR2_C	GO:GO:0003674
GO:GO:0005488	GO:GO:0008289	EnsemblPlantsGene:GSMUA_Achr4G05670_001	EnsemblPlants:GSMUA_Achr4P05670_001	EnsemblPlants:GSMUA_Achr4T05670_001	InterPro:IPR001849
InterPro:IPR002913	InterPro:IPR011993	InterPro:IPR023393	UniProt:M0SLD4	PFAM:PF01852	PFAM:PF07059
InterPro:PH-like_dom_sf	InterPro:PH_domain	PFscan:PS50003	PFscan:PS50848	PANTHER:PTHR12136	PANTHER:PTHR12136:SF64
SMART:SM00233	SMART:SM00234	SUPFAM:SSF50729	SUPFAM:SSF55961	InterPro:START-like_dom_sf	InterPro:START_lipid-bd_dom
UniParc:UPI0002962C83	SEG:seg	:	:	:	:

Description

START domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr4G05670_001]

Coordinates

chr4:+:4382172..4398297

Molecular Weight (calculated)

82660.0 Da

IEP (calculated)

7.212

GRAVY (calculated)

-0.292

Length

727 amino acids

Sequence
(BLAST)

001: MAKVVCEGWM VRYGRRKIGK SFFHMRYFVL ETRLLAYYKR KPTDTTVPLK TLVIDGNCRV EDRGLKTHQG HMVYVLCVYN KKETNQQIMV GAYNIQDALN
101: WKEKIELVID QQHGSVTSNG NRTSVSSDLG MDIDRNESSS SHERQKIIPL YYRGQPLGMA LLIQYLTGRV IKFLLESIGD WSVARMARLR IFEELVEVDL
201: PRRYSKTMKA VGVVDATCEA IFGLVMTMDG TRFEWDCSFQ HGSLVEEVDG HTAILYHRLQ LEWFSRFVWP RDLCYVRYWR RNDDGSYVVL FRSRDHPNCG
301: PQRGFVRAHI ESGGFKISPL RSRDGRPRTQ VQQLMQIDLK GWFVGYFPSF QQHCLLHMLN SVAGIRELFS QTDEIHTANR IPIMVSMTSD SVSSKKEQKT
401: EEISFQPGVS LDQVFNDNRQ PIILDEDSDE DEDNQVPEAE EEGSSIKTGN NIKQPDIEVE TSDILDTSCF SGNLRWDDGE DSRNCWKIPD GNIFKVRSEN
501: FFKDKSKIPA GKYLMELVAV DWLKNTKRMD HVAQRTGCAA QVASEKGLFT LVINLQIPGS THYSMVFYYV KKQLVPGSLL QRFADGDDEF RNSRLKLIPS
601: VPKGSWIVRQ SVGSNPCLLG KAVDCSYIRG EKYLELDVDI GSSAVANGVL GLVCGVLTSL VVDMAFLIQA VTSDELPERL IGAVRVSHVE LSSALPGFCL
701: YSYLMSSKSS SSPASRQTWH ITLWYAI

Best Arabidopsis Sequence Match ( AT4G19040.1 )
(BLAST)

001: MSKVVYEGWM VRYGRRKIGR SYIHMRYFVL EPRLLAYYKK KPQDYQVPIK TMLIDGNCRV EDRGLKTHHG HMVYVLSVYN KKEKSHRITM AAFNIQEALM
101: WKEKIESVID QHQESQVPNG QQYVSFEYKS GMDTGRTASS SDHESQFSAA EDEEDSRRSL MRRTTIGNGP PESVLDWTKE FDAELANQNS DNQAFSRKHW
201: RLLQCQNGLR IFEELLEVDY LPRSCSRAMK AVGVVEATCE EIFELLMSMD GTRYEWDCSF QFGSLVEEVD GHTAVLYHRL LLDWFPMIVW PRDLCYVRYW
301: RRNDDGSYVV LFRSREHENC GPQPGCVRAH LESGGYNISP LKPRNGRPRT QVQHLIQIDL KGWGAGYLPA FQQHCLLQML NSVAGLREWF SQTDERGVHT
401: RIPVMVNMAS SSLSLTKSGK SLHKSAFSLD QTNSVNRNSL LMDEDSDDDD EFQIAESEQE PETSKPETDV KRPEEEPAHN IDLSCFSGNL KRNENENARN
501: CWRISDGNNF KVRGKNFGQE KRKIPAGKHL MDLVAVDWFK DSKRIDHVAR RKGCAAQVAA EKGLFSMVVN VQVPGSTHYS MVFYFVMKEL VPGSLLQRFV
601: DGDDEFRNSR LKLIPLVPKG SWIVRQSVGS TPCLLGKAVD CNYIRGPTYL EIDVDIGSST VANGVLGLVI GVITSLVVEM AFLVQANTAE EQPERLIGAV
701: RVSHIELSSA IVPNLESE

Arabidopsis Description

EDR2ENHANCED DISEASE RESISTANCE 2 [Source:TAIR;Acc:AT4G19040]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.