Factsheet for Zm00001d032685_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os10t0479800-01	Rice	cytosol	15.38	98.33
EER91476	Sorghum	nucleus	91.39	91.63
TraesCS1D01G155000.1	Wheat	nucleus	84.48	85.38
TraesCS1B01G173600.1	Wheat	nucleus	84.35	85.24
TraesCS1A01G156500.1	Wheat	nucleus	83.96	84.85
HORVU1Hr1G041740.29	Barley	extracellular, nucleus, plasma membrane	79.92	78.99
VIT_06s0004g02720.t01	Wine grape	cytosol	65.97	68.94
GSMUA_Achr4P18250_001	Banana	mitochondrion	27.64	67.95
GSMUA_Achr5P14640_001	Banana	cytosol, extracellular, mitochondrion, nucleus	65.19	67.93
Solyc11g069530.1.1	Tomato	cytosol	64.02	67.26
KRH26439	Soybean	cytosol, extracellular, nucleus, plastid	64.54	67.26
KRH22877	Soybean	plastid	64.41	66.94
PGSC0003DMT400062486	Potato	nucleus	62.84	65.85
GSMUA_Achr11P...	Banana	cytosol	47.72	65.36
Solyc06g075130.2.1	Tomato	nucleus	60.23	65.07
GSMUA_Achr2P00220_001	Banana	nucleus	56.98	64.08
CDY04553	Canola	cytosol	60.89	63.89
Bra011959.1-P	Field mustard	cytosol	61.02	63.85
CDX71361	Canola	cytosol	61.02	63.85
AT2G28320.1	Thale cress	cytosol	60.5	62.96
Zm00001d035973_P005	Maize	nucleus, plastid	30.64	31.42
Zm00001d032166_P003	Maize	endoplasmic reticulum, plasma membrane	14.73	30.46
Zm00001d007093_P006	Maize	nucleus	29.73	28.61
Zm00001d054090_P008	Maize	cytosol, plastid	29.47	28.29
Zm00001d014928_P002	Maize	cytosol, mitochondrion	29.34	28.16
Zm00001d014442_P007	Maize	cytosol, nucleus, plasma membrane, plastid	26.08	27.62
Zm00001d019662_P001	Maize	mitochondrion	6.13	26.26
Zm00001d014641_P001	Maize	cytosol, extracellular, nucleus	10.69	25.23
Zm00001d036506_P001	Maize	extracellular, nucleus, plastid	10.43	24.46
Zm00001d024605_P001	Maize	mitochondrion	11.47	20.28

Protein Annotations

Gene3D:2.30.29.30	Gene3D:3.30.530.20	MapMan:35.1	UniProt:A0A1D6KSV2	InterPro:EDR2_C	GO:GO:0003674
GO:GO:0005488	GO:GO:0008289	InterPro:IPR001849	InterPro:IPR002913	InterPro:IPR011993	InterPro:IPR023393
ProteinID:ONM05729.1	PFAM:PF00169	PFAM:PF01852	PFAM:PF07059	InterPro:PH-like_dom_sf	InterPro:PH_domain
PFscan:PS50003	PFscan:PS50848	PANTHER:PTHR12136	PANTHER:PTHR12136:SF86	SMART:SM00233	SMART:SM00234
SUPFAM:SSF50729	SUPFAM:SSF55961	InterPro:START-like_dom_sf	InterPro:START_lipid-bd_dom	UniParc:UPI0008448D4B	EnsemblPlantsGene:Zm00001d032685
EnsemblPlants:Zm00001d032685_P001	EnsemblPlants:Zm00001d032685_T001	SEG:seg	:	:	:

Description

Pleckstrin homology (PH) and lipid-binding START domains-containing protein

Coordinates

chr1:-:234348177..234361746

Molecular Weight (calculated)

86425.8 Da

IEP (calculated)

7.924

GRAVY (calculated)

-0.338

Length

767 amino acids

Sequence
(BLAST)

001: MAGGEVAVVE ETAVGAPTAT ATPPDLAAHA AAGGGEEAMR MEGWLYLIRS NRFGMQYSRK RYFVLEDAAL RCFKSTPSSK REDPVRSAII DSCIRVTDNG
101: RESVHRSDFY IFTLYNSSNH YDQLKLGARS SEEAARWIRC LMESALKQSP RKDEHIVACS HRRWQAFRLS RRNSRMHSID WTLFSSAHND PMASDVIAPS
201: PWTIFGCTNG LRLFTEANDG GSHGKVYLTH QRVVHAHGFI VKFIIIRLFP QYWDDHPAIM AVGVVDANSE AVFQTLMSLG QSRSEWDFCL REGKVIEHLD
301: GHTDIIQKKL RSDWLPWGMR KRDLLLRRYW RREDDGTYVI LYHSVFHYKC RPEKGYIRAC LKSGGYVISP VNQGRQSVVK HMLAIDWKFW KSYLFTSSAK
401: YITIRMLGRV AALREFFRAK NGNCSCMEFS SGELTRDTGL PQGENQRINL EMQQENENGR LEGPTEGSLG GSNRHLSSTG SFVQLNDAAD EFFDVPDESE
501: YDQREVMFPS DESLHAADQR HAKLSTAAVF VKRLHDLAVQ KRGYIDLQGA ADADNGPCCY GYTLPKDSSY TIKANSTLMQ MVGADWIKSD KREDDLAGRP
601: GGLVQKCAAQ GGTRFFFIVN IQVPGSTTYS LALYYMMDTP LEKVPLLERF VNGDDAFRNS RFKLIPYISK GSWIVKQSVG KKACLVGQAL EINYFRGRNY
701: LELGVDIGSS TVARGVVSLV LGYLNNLVIE MAFLVQGNTN EELPEFLLGT CRLNYLDASK AVSIDEC

Best Arabidopsis Sequence Match ( AT2G28320.1 )
(BLAST)

001: MAFGSENESE TKMEGWLYII RSNRFGLHFS RKRYFVLGDH LLKSFKSISD SKTKNAGRSA VIDSCIRVTD NGRENVHRKA FFIFTLYNTS NHNDQLKLGA
101: SSPEDAARWI NLIKEAALKG APFPGDVFNC SRSRWDSLRL SSSVRDHHSN SIDWTLRSSA RVDPVTTDVV APSPWTIFGC QNGLRLFKEA KERDSLGRWD
201: DHPAIMAVGV VDGTSETIFQ TLLSLGPSRS EWDFCFYQGS VVEHLDGHTD IIHKQLYSDW LPWGMKRRDF SLRRYWRRED DGTYVILYHS VFHKKCPPQK
301: GYVRACLKSG GYVISPIDNG KQSVVKHMLA VDWKSWRSYV KPSLARSITV KMLGRISALR ELFRAKHGSF PPNLSSGELS RSARLTQNED GVFGDSSLRE
401: NEMFKDTANE ERDKFPSERS SLVDLDEFFD VPEPSDNDNL DDSWTSDFDL DTCCQESRQP KLNSATSLVK KLHDLAVQKR GYVDLHERAK EESSPHATCN
501: PPCCYGTTLP TDPSCDLPCS WTTTDPSTFL IRGKTYLDDQ KKVKAKGTLM EMVAADWLKS DKREDDLGSR PGGIVQKYAA KGGPEFFFIV NIQVPGSTTY
601: SLVLYYMMST PIEEHPLLVS FVNGDDAYRN SRFKLIPYIS KGSWIVKQSV GKKACLIGQA LEINYFRGKN YIELGVDIGS STVARGVVSL VLGYLNKLVI
701: EMAFLIQANT EEELPEYLLG TCRFNHLDAS KAISIIP

Arabidopsis Description

Pleckstrin homology (PH) and lipid-binding START domains-containing protein [Source:UniProtKB/TrEMBL;Acc:F4IHT0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.