Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 3
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc06g075130.2.1 | Tomato | nucleus | 91.53 | 94.37 |
| Os10t0479800-01 | Rice | cytosol | 13.39 | 81.67 |
| VIT_06s0004g02720.t01 | Wine grape | cytosol | 77.46 | 77.25 |
| GSMUA_Achr4P18250_001 | Banana | mitochondrion | 31.01 | 72.76 |
| KRH26439 | Soybean | cytosol, extracellular, nucleus, plastid | 71.72 | 71.33 |
| KRH22877 | Soybean | plastid | 71.72 | 71.14 |
| CDY04553 | Canola | cytosol | 69.67 | 69.77 |
| Bra011959.1-P | Field mustard | cytosol | 69.4 | 69.3 |
| CDX71361 | Canola | cytosol | 69.4 | 69.3 |
| AT2G28320.1 | Thale cress | cytosol | 68.72 | 68.25 |
| TraesCS1D01G155000.1 | Wheat | nucleus | 68.58 | 66.14 |
| GSMUA_Achr1P08990_001 | Banana | nucleus | 62.84 | 66.0 |
| GSMUA_Achr11P... | Banana | cytosol | 50.41 | 65.89 |
| TraesCS1A01G156500.1 | Wheat | nucleus | 68.31 | 65.88 |
| TraesCS1B01G173600.1 | Wheat | nucleus | 68.17 | 65.74 |
| EER91476 | Sorghum | nucleus | 68.17 | 65.23 |
| GSMUA_Achr5P14640_001 | Banana | cytosol, extracellular, mitochondrion, nucleus | 64.48 | 64.13 |
| Zm00001d032685_P001 | Maize | nucleus | 65.85 | 62.84 |
| HORVU1Hr1G041740.29 | Barley | extracellular, nucleus, plasma membrane | 66.12 | 62.37 |
| GSMUA_Achr2P00220_001 | Banana | nucleus | 58.06 | 62.32 |
| PGSC0003DMT400067616 | Potato | cytosol | 12.84 | 32.41 |
| PGSC0003DMT400047520 | Potato | cytosol | 31.56 | 32.35 |
| PGSC0003DMT400038272 | Potato | mitochondrion | 12.84 | 29.84 |
| PGSC0003DMT400042135 | Potato | cytosol | 10.66 | 24.68 |
Protein Annotations
| EntrezGene:102579740 | Gene3D:2.30.29.30 | Gene3D:3.30.530.20 | MapMan:35.1 | InterPro:EDR2_C | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0008289 | GO:GO:0016020 |
| InterPro:IPR001849 | InterPro:IPR002913 | InterPro:IPR011993 | InterPro:IPR023393 | UniProt:M1C951 | PFAM:PF00169 |
| PFAM:PF01852 | PFAM:PF07059 | EnsemblPlantsGene:PGSC0003DMG400024318 | PGSC:PGSC0003DMG400024318 | EnsemblPlants:PGSC0003DMT400062486 | InterPro:PH-like_dom_sf |
| InterPro:PH_domain | PFscan:PS50003 | PFscan:PS50848 | PANTHER:PTHR12136 | PANTHER:PTHR12136:SF86 | SMART:SM00233 |
| SMART:SM00234 | SUPFAM:SSF50729 | SUPFAM:SSF55961 | InterPro:START-like_dom_sf | InterPro:START_lipid-bd_dom | UniParc:UPI00029548A0 |
| RefSeq:XP_006365757.1 | : | : | : | : | : |
Description
Pleckstrin homology (PH) domain-containing protein / lipid-binding START domain-containing protein [Source:PGSC_GENE;Acc:PGSC0003DMG400024318]
Coordinates
chr6:+:55788699..55796265
Molecular Weight (calculated)
83279.4 Da
IEP (calculated)
8.202
GRAVY (calculated)
-0.402
Length
732 amino acids
Sequence
(BLAST)
(BLAST)
001: MGVSQNDSCR MEGWLYLIRS NRFGLQYSRK RYFVLHDLLF KSYKSNPVTN IEDPVRSAVI DSCIRVTDNG RESIQRKVVF IFTLYNASNH NDQLKLGANR
101: PEEAARWIQA LQEAALKADM NKRTAVDRPR RDSQSLRLNC SNKSHHLNSI DWTFCSSSVA DATTSDVVAP SSWTIFGCQN GLRLFKEAKD RESHGKWNDH
201: PAIMAVGVVD GTSEAIFQTL MSLGPSRSEW DFCHYKGSVI EHLDGHTDIV HKLLRRDWLP WSMRKRDLLL QRYWRREDDG TYVILYHSVF HQKCPCQKGY
301: VRACLKSGGY VISPVNQKKQ SVVKHMLAID WRFWKSNLQT SSTRYITIHM LGRLAALREL FIAKLGDCSS SYFLEEHVRD KRLQQIEEVK VEIQTIVENG
401: KNMADMEEEV AKSPSEHASL MGLNDASDEF FDVSEPLDYD QSENGWPSDF GPEMYSQDTR HARLSSAAGF VKKLHDLAVH KRGYVDLHEK AKEDALLCHY
501: GSTLPKDPTF NLPCSWAQTD PSTFLIRGET YLEDRKKIKA KGTLMQMVAA DWLKSDKRED DLGGRPGSIV QKYAAKGGPE FFFIVNIQVP GSTTYTLALY
601: YMMDTPIENA PLLESFVKGD DAFRNSRFKL IPYISKGPWI VKQSVGKKAC LVGPALEINY FRGKNYLELD INVGSSTVAR GVVSLVVGYL NNLVIEMAFL
701: IQANTPEELP EYLLATCRLN HLDISKAVQV KP
101: PEEAARWIQA LQEAALKADM NKRTAVDRPR RDSQSLRLNC SNKSHHLNSI DWTFCSSSVA DATTSDVVAP SSWTIFGCQN GLRLFKEAKD RESHGKWNDH
201: PAIMAVGVVD GTSEAIFQTL MSLGPSRSEW DFCHYKGSVI EHLDGHTDIV HKLLRRDWLP WSMRKRDLLL QRYWRREDDG TYVILYHSVF HQKCPCQKGY
301: VRACLKSGGY VISPVNQKKQ SVVKHMLAID WRFWKSNLQT SSTRYITIHM LGRLAALREL FIAKLGDCSS SYFLEEHVRD KRLQQIEEVK VEIQTIVENG
401: KNMADMEEEV AKSPSEHASL MGLNDASDEF FDVSEPLDYD QSENGWPSDF GPEMYSQDTR HARLSSAAGF VKKLHDLAVH KRGYVDLHEK AKEDALLCHY
501: GSTLPKDPTF NLPCSWAQTD PSTFLIRGET YLEDRKKIKA KGTLMQMVAA DWLKSDKRED DLGGRPGSIV QKYAAKGGPE FFFIVNIQVP GSTTYTLALY
601: YMMDTPIENA PLLESFVKGD DAFRNSRFKL IPYISKGPWI VKQSVGKKAC LVGPALEINY FRGKNYLELD INVGSSTVAR GVVSLVVGYL NNLVIEMAFL
701: IQANTPEELP EYLLATCRLN HLDISKAVQV KP
001: MAFGSENESE TKMEGWLYII RSNRFGLHFS RKRYFVLGDH LLKSFKSISD SKTKNAGRSA VIDSCIRVTD NGRENVHRKA FFIFTLYNTS NHNDQLKLGA
101: SSPEDAARWI NLIKEAALKG APFPGDVFNC SRSRWDSLRL SSSVRDHHSN SIDWTLRSSA RVDPVTTDVV APSPWTIFGC QNGLRLFKEA KERDSLGRWD
201: DHPAIMAVGV VDGTSETIFQ TLLSLGPSRS EWDFCFYQGS VVEHLDGHTD IIHKQLYSDW LPWGMKRRDF SLRRYWRRED DGTYVILYHS VFHKKCPPQK
301: GYVRACLKSG GYVISPIDNG KQSVVKHMLA VDWKSWRSYV KPSLARSITV KMLGRISALR ELFRAKHGSF PPNLSSGELS RSARLTQNED GVFGDSSLRE
401: NEMFKDTANE ERDKFPSERS SLVDLDEFFD VPEPSDNDNL DDSWTSDFDL DTCCQESRQP KLNSATSLVK KLHDLAVQKR GYVDLHERAK EESSPHATCN
501: PPCCYGTTLP TDPSCDLPCS WTTTDPSTFL IRGKTYLDDQ KKVKAKGTLM EMVAADWLKS DKREDDLGSR PGGIVQKYAA KGGPEFFFIV NIQVPGSTTY
601: SLVLYYMMST PIEEHPLLVS FVNGDDAYRN SRFKLIPYIS KGSWIVKQSV GKKACLIGQA LEINYFRGKN YIELGVDIGS STVARGVVSL VLGYLNKLVI
701: EMAFLIQANT EEELPEYLLG TCRFNHLDAS KAISIIP
101: SSPEDAARWI NLIKEAALKG APFPGDVFNC SRSRWDSLRL SSSVRDHHSN SIDWTLRSSA RVDPVTTDVV APSPWTIFGC QNGLRLFKEA KERDSLGRWD
201: DHPAIMAVGV VDGTSETIFQ TLLSLGPSRS EWDFCFYQGS VVEHLDGHTD IIHKQLYSDW LPWGMKRRDF SLRRYWRRED DGTYVILYHS VFHKKCPPQK
301: GYVRACLKSG GYVISPIDNG KQSVVKHMLA VDWKSWRSYV KPSLARSITV KMLGRISALR ELFRAKHGSF PPNLSSGELS RSARLTQNED GVFGDSSLRE
401: NEMFKDTANE ERDKFPSERS SLVDLDEFFD VPEPSDNDNL DDSWTSDFDL DTCCQESRQP KLNSATSLVK KLHDLAVQKR GYVDLHERAK EESSPHATCN
501: PPCCYGTTLP TDPSCDLPCS WTTTDPSTFL IRGKTYLDDQ KKVKAKGTLM EMVAADWLKS DKREDDLGSR PGGIVQKYAA KGGPEFFFIV NIQVPGSTTY
601: SLVLYYMMST PIEEHPLLVS FVNGDDAYRN SRFKLIPYIS KGSWIVKQSV GKKACLIGQA LEINYFRGKN YIELGVDIGS STVARGVVSL VLGYLNKLVI
701: EMAFLIQANT EEELPEYLLG TCRFNHLDAS KAISIIP
Arabidopsis Description
Pleckstrin homology (PH) and lipid-binding START domains-containing protein [Source:UniProtKB/TrEMBL;Acc:F4IHT0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.