Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular, nucleus
Predictor Summary:
Predictor Summary:
- extracellular 1
- nucleus 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os10t0479800-01 | Rice | cytosol | 15.21 | 98.33 |
| TraesCS1D01G155000.1 | Wheat | nucleus | 88.66 | 90.65 |
| TraesCS1B01G173600.1 | Wheat | nucleus | 88.14 | 90.12 |
| TraesCS1A01G156500.1 | Wheat | nucleus | 87.89 | 89.86 |
| EER91476 | Sorghum | nucleus | 81.44 | 82.61 |
| Zm00001d032685_P001 | Maize | nucleus | 78.99 | 79.92 |
| GSMUA_Achr4P18250_001 | Banana | mitochondrion | 30.28 | 75.32 |
| GSMUA_Achr11P... | Banana | cytosol | 50.13 | 69.46 |
| GSMUA_Achr5P14640_001 | Banana | cytosol, extracellular, mitochondrion, nucleus | 65.21 | 68.75 |
| Solyc06g075130.2.1 | Tomato | nucleus | 61.98 | 67.75 |
| VIT_06s0004g02720.t01 | Wine grape | cytosol | 63.66 | 67.3 |
| Solyc11g069530.1.1 | Tomato | cytosol | 63.27 | 67.26 |
| KRH26439 | Soybean | cytosol, extracellular, nucleus, plastid | 63.27 | 66.71 |
| KRH22877 | Soybean | plastid | 63.27 | 66.53 |
| PGSC0003DMT400062486 | Potato | nucleus | 62.37 | 66.12 |
| CDY04553 | Canola | cytosol | 61.98 | 65.8 |
| CDX71361 | Canola | cytosol | 61.98 | 65.62 |
| Bra011959.1-P | Field mustard | cytosol | 61.86 | 65.48 |
| GSMUA_Achr2P00220_001 | Banana | nucleus | 56.44 | 64.22 |
| AT2G28320.1 | Thale cress | cytosol | 60.44 | 63.64 |
| HORVU7Hr1G117780.12 | Barley | plastid | 29.51 | 30.82 |
| HORVU6Hr1G002050.2 | Barley | plastid | 27.84 | 27.17 |
| HORVU7Hr1G008800.4 | Barley | plastid | 28.35 | 26.32 |
| HORVU7Hr1G098100.1 | Barley | plastid | 11.73 | 25.71 |
| HORVU7Hr1G072050.4 | Barley | cytosol | 10.44 | 25.63 |
| HORVU5Hr1G053070.9 | Barley | cytosol, nucleus | 24.61 | 25.2 |
Protein Annotations
| EnsemblPlants:HORVU1Hr1G041740.29 | EnsemblPlantsGene:HORVU1Hr1G041740 | Gene3D:3.30.530.20 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0008289 |
| InterPro:EDR2_C | InterPro:IPR002913 | InterPro:IPR023393 | InterPro:START-like_dom_sf | InterPro:START_lipid-bd_dom | PANTHER:PTHR12136 |
| PANTHER:PTHR12136:SF86 | PFAM:PF01852 | PFAM:PF07059 | PFscan:PS50848 | SMART:SM00234 | SUPFAM:SSF55961 |
| TMHMM:TMhelix | UniParc:UPI000B4649CE | UniProt:A0A287FA00 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chrchr1H:-:298471690..298480218
Molecular Weight (calculated)
87585.6 Da
IEP (calculated)
8.138
GRAVY (calculated)
-0.279
Length
776 amino acids
Sequence
(BLAST)
(BLAST)
001: MKQVCTAENN LHGVGFLLLK IKSFLHSQSD HNKADAPTLI RVLNIFGTPF SQIYHAYAFH KLSFSATFFL LQLYVLLKYD VMFVLLPPPL IQDPVRSAVI
101: DSCIRVTDNG RESVHRSIFY IFTLYNASNH YDQLKLGARS SEEAARWIRC LMESALKSPR KDEHVVACSH RRWQAFRLSR RSNRMHSIDW TILSSSHNDP
201: MASDVIAPSA WTIFGCTNGL RLFTEAKDGG SRGKYWDDHP AIMAVGVVDA NSEDIFQTLM SLGQSRSEWD FCLREGRVVE HLDGHSDIIH KKLRGDWLPW
301: GMRKRDLLLR RYWRREDDGT YVILYHSVFH NRCSPEKGYI RACLKSGGYV ISPVSQGRQS VVKHMLAIDW KFWKSYLLTS SAKYITIRML GRVAALRELF
401: RAKNGNCACM EFSSGELTRD TGLPQGGNER RKIEMQSANE CGRLEGPVEG LQGGSNRQLS STGSLVQLND ATDEFFDVPD ESEYDQREAM WSSDESTHAV
501: DQRHAKLSSA AVFVRKLHDL AVQKRGYVDL QGAADADNAP CYYGHTLPKD SSCTIPSSWS MTDPTTFLIR GESYLIDRQK IKAENTLMQM VGADWIKSDK
601: REDDLAGRPG GLVQKYAAQG GSKFFFIVNI QVPGSTTYSL ALYYMMDTPL EKVPLLERFV NGDDTFRNSR FKLIPYISKG SWIVKQSVGK KACLVGQALE
701: INYFRGSNYL ELGVDIGSST VARGVVSLVL GYLNNLVIEM AFLVQGNTQE ELPEFLLGTC RLNYLDASKA VSLDEC
101: DSCIRVTDNG RESVHRSIFY IFTLYNASNH YDQLKLGARS SEEAARWIRC LMESALKSPR KDEHVVACSH RRWQAFRLSR RSNRMHSIDW TILSSSHNDP
201: MASDVIAPSA WTIFGCTNGL RLFTEAKDGG SRGKYWDDHP AIMAVGVVDA NSEDIFQTLM SLGQSRSEWD FCLREGRVVE HLDGHSDIIH KKLRGDWLPW
301: GMRKRDLLLR RYWRREDDGT YVILYHSVFH NRCSPEKGYI RACLKSGGYV ISPVSQGRQS VVKHMLAIDW KFWKSYLLTS SAKYITIRML GRVAALRELF
401: RAKNGNCACM EFSSGELTRD TGLPQGGNER RKIEMQSANE CGRLEGPVEG LQGGSNRQLS STGSLVQLND ATDEFFDVPD ESEYDQREAM WSSDESTHAV
501: DQRHAKLSSA AVFVRKLHDL AVQKRGYVDL QGAADADNAP CYYGHTLPKD SSCTIPSSWS MTDPTTFLIR GESYLIDRQK IKAENTLMQM VGADWIKSDK
601: REDDLAGRPG GLVQKYAAQG GSKFFFIVNI QVPGSTTYSL ALYYMMDTPL EKVPLLERFV NGDDTFRNSR FKLIPYISKG SWIVKQSVGK KACLVGQALE
701: INYFRGSNYL ELGVDIGSST VARGVVSLVL GYLNNLVIEM AFLVQGNTQE ELPEFLLGTC RLNYLDASKA VSLDEC
001: MAFGSENESE TKMEGWLYII RSNRFGLHFS RKRYFVLGDH LLKSFKSISD SKTKNAGRSA VIDSCIRVTD NGRENVHRKA FFIFTLYNTS NHNDQLKLGA
101: SSPEDAARWI NLIKEAALKG APFPGDVFNC SRSRWDSLRL SSSVRDHHSN SIDWTLRSSA RVDPVTTDVV APSPWTIFGC QNGLRLFKEA KERDSLGRWD
201: DHPAIMAVGV VDGTSETIFQ TLLSLGPSRS EWDFCFYQGS VVEHLDGHTD IIHKQLYSDW LPWGMKRRDF SLRRYWRRED DGTYVILYHS VFHKKCPPQK
301: GYVRACLKSG GYVISPIDNG KQSVVKHMLA VDWKSWRSYV KPSLARSITV KMLGRISALR ELFRAKHGSF PPNLSSGELS RSARLTQNED GVFGDSSLRE
401: NEMFKDTANE ERDKFPSERS SLVDLDEFFD VPEPSDNDNL DDSWTSDFDL DTCCQESRQP KLNSATSLVK KLHDLAVQKR GYVDLHERAK EESSPHATCN
501: PPCCYGTTLP TDPSCDLPCS WTTTDPSTFL IRGKTYLDDQ KKVKAKGTLM EMVAADWLKS DKREDDLGSR PGGIVQKYAA KGGPEFFFIV NIQVPGSTTY
601: SLVLYYMMST PIEEHPLLVS FVNGDDAYRN SRFKLIPYIS KGSWIVKQSV GKKACLIGQA LEINYFRGKN YIELGVDIGS STVARGVVSL VLGYLNKLVI
701: EMAFLIQANT EEELPEYLLG TCRFNHLDAS KAISIIP
101: SSPEDAARWI NLIKEAALKG APFPGDVFNC SRSRWDSLRL SSSVRDHHSN SIDWTLRSSA RVDPVTTDVV APSPWTIFGC QNGLRLFKEA KERDSLGRWD
201: DHPAIMAVGV VDGTSETIFQ TLLSLGPSRS EWDFCFYQGS VVEHLDGHTD IIHKQLYSDW LPWGMKRRDF SLRRYWRRED DGTYVILYHS VFHKKCPPQK
301: GYVRACLKSG GYVISPIDNG KQSVVKHMLA VDWKSWRSYV KPSLARSITV KMLGRISALR ELFRAKHGSF PPNLSSGELS RSARLTQNED GVFGDSSLRE
401: NEMFKDTANE ERDKFPSERS SLVDLDEFFD VPEPSDNDNL DDSWTSDFDL DTCCQESRQP KLNSATSLVK KLHDLAVQKR GYVDLHERAK EESSPHATCN
501: PPCCYGTTLP TDPSCDLPCS WTTTDPSTFL IRGKTYLDDQ KKVKAKGTLM EMVAADWLKS DKREDDLGSR PGGIVQKYAA KGGPEFFFIV NIQVPGSTTY
601: SLVLYYMMST PIEEHPLLVS FVNGDDAYRN SRFKLIPYIS KGSWIVKQSV GKKACLIGQA LEINYFRGKN YIELGVDIGS STVARGVVSL VLGYLNKLVI
701: EMAFLIQANT EEELPEYLLG TCRFNHLDAS KAISIIP
Arabidopsis Description
Pleckstrin homology (PH) and lipid-binding START domains-containing protein [Source:UniProtKB/TrEMBL;Acc:F4IHT0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.