Skip to main content
crop-pal logo
Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 3
  • cytosol 3
  • plastid 1
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7D01G299000.1 Wheat cytosol 68.42 79.94
TraesCS7B01G203900.1 Wheat cytosol 68.14 79.61
TraesCS7A01G303600.1 Wheat cytosol 68.14 79.61
HORVU7Hr1G072050.4 Barley cytosol 68.7 78.48
TraesCS2A01G242800.1 Wheat cytosol 65.1 76.05
KXG24431 Sorghum plastid 68.7 62.16
KRH23216 Soybean cytosol 36.84 60.18
PGSC0003DMT400042135 Potato cytosol 52.63 60.13
KRH24608 Soybean cytosol 51.25 59.68
AT1G06050.1 Thale cress cytosol 51.52 59.42
Bra015470.1-P Field mustard cytosol 49.58 58.12
VIT_05s0102g00770.t01 Wine grape cytosol 57.06 57.22
Solyc06g053360.2.1 Tomato cytosol 47.09 55.74
Zm00001d024605_P001 Maize mitochondrion 66.48 55.3
KRH10121 Soybean endoplasmic reticulum, golgi 52.91 54.42
KRH29613 Soybean cytosol 43.77 53.38
GSMUA_Achr1P11490_001 Banana plastid 56.23 50.88
Os10t0479800-01 Rice cytosol 14.96 45.0
Os09t0107600-00 Rice extracellular 9.14 37.08
CDY10168 Canola nucleus 50.97 32.62
Os08t0439100-01 Rice plasma membrane 28.81 13.63
Os02t0102800-01 Rice plasma membrane 26.04 11.69
Os10t0455900-01 Rice plasma membrane 3.88 4.44
Os06t0116500-01 Rice plastid 1.94 1.91
Protein Annotations
EMBL:AK068444EnsemblPlants:Os08t0152600-01EnsemblPlantsGene:Os08g0152600EntrezGene:4344673GO:GO:0003674GO:GO:0005488
GO:GO:0008289InterPro:EDR2_CPANTHER:PTHR12136PANTHER:PTHR12136:SF61PFAM:PF07059ProteinID:BAC99761.1
ProteinID:BAF22919.1ProteinID:BAT03855.1RefSeq:XP_015650529.1RefSeq:XP_015650530.1UniParc:UPI00001D8DEDUniProt:Q7EYH4
MapMan:35.1:::::
Description
Protein of unknown function DUF1336 domain containing protein. (Os08t0152600-01)
Coordinates
chr8:-:3013807..3016330
Molecular Weight (calculated)
39709.3 Da
IEP (calculated)
4.404
GRAVY (calculated)
-0.461
Length
361 amino acids
Sequence
(BLAST)
001: MDCSNGEVQH QWMEDVKSGG AVPFLDPDNC PNGWATPPGD TFMVRGPDYL ATKVKIPGGE YLLKPLGFDW MKSPAKICEI LNNKSHRVRK AIDGEVLRGN
101: QPFVWAFNLQ LPSKDNYSAI FYFVSLEPVP EGSLMDQFLK GDEAFRKSRL KLIANIVRGP WIVRTAVGEQ AICILGRALT CKYTQGSNFI EIDVDVGSSI
201: VANAIVHLAF GYVQTLTVDL AFLIEGQTES ELPERLLGAV RFSELNPGSA GVYEVPSEEQ QESAPFLPAR LWQGFSNMLH NPGNSREPSS TSQSTNGSLH
301: KEDADENTRE SLHKEDVDDN TAGSLLKEDG YESATGSFDK EDTEEDSNGS LHNGDADENT K
Best Arabidopsis Sequence Match ( AT1G06050.1 )
(BLAST)
001: MAGSVGEETE PEWIKRVKLE GAVPCLKPDD NCKNGWTTPS PDTFMVRGPK YFSDKVKIPA GDFLLKPLGF DWIKGPKKLS EILSYPSSRI RKVIDEEFQK
101: DGTKPFVWAF NLQLPHKDNY SAVAYFVTTE PILEGSLMDR FLKGDDGFKK SRLKLIANIV KGPWIVRKAV GEQAICVIGR ALSCKYVSGE NFVEIDVDIG
201: SSMVASAIVH LAFGYVTTLT VDLAFLIESQ TEAELPEKLL GAVRFSELQT ESATSIELSS STSNDQWDQT TSERSSWWKS IGNGFSNLLN QDTANMNNTS
301: HGDIQKDEHV QKQ
Arabidopsis Description
Protein of unknown function (DUF1336) [Source:TAIR;Acc:AT1G06050]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.