Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G203900.1 | Wheat | cytosol | 99.68 | 99.68 |
| TraesCS7A01G303600.1 | Wheat | cytosol | 99.35 | 99.35 |
| TraesCS2A01G242800.1 | Wheat | cytosol | 96.12 | 96.12 |
| HORVU7Hr1G072050.4 | Barley | cytosol | 96.44 | 94.3 |
| Os08t0152600-01 | Rice | cytosol | 79.94 | 68.42 |
| PGSC0003DMT400042135 | Potato | cytosol | 63.43 | 62.03 |
| AT1G06050.1 | Thale cress | cytosol | 62.14 | 61.34 |
| KXG24431 | Sorghum | plastid | 78.64 | 60.9 |
| KRH24608 | Soybean | cytosol | 60.84 | 60.65 |
| KRH23216 | Soybean | cytosol | 43.37 | 60.63 |
| Bra015470.1-P | Field mustard | cytosol | 59.87 | 60.06 |
| VIT_05s0102g00770.t01 | Wine grape | cytosol | 66.02 | 56.67 |
| Solyc06g053360.2.1 | Tomato | cytosol | 55.34 | 56.07 |
| KRH10121 | Soybean | endoplasmic reticulum, golgi | 63.11 | 55.56 |
| Zm00001d024605_P001 | Maize | mitochondrion | 77.35 | 55.07 |
| KRH29613 | Soybean | cytosol | 50.81 | 53.04 |
| GSMUA_Achr1P11490_001 | Banana | plastid | 66.34 | 51.38 |
| TraesCS7D01G417100.2 | Wheat | cytosol, mitochondrion, nucleus | 36.89 | 35.51 |
| CDY10168 | Canola | nucleus | 60.52 | 33.16 |
| TraesCS7D01G523200.2 | Wheat | plastid | 31.72 | 13.52 |
| TraesCS5D01G177500.2 | Wheat | cytosol | 33.01 | 13.39 |
| TraesCS7D01G045000.1 | Wheat | cytosol, nucleus, plastid | 31.07 | 12.55 |
| TraesCS1D01G155000.1 | Wheat | nucleus | 26.54 | 10.8 |
| TraesCS6D01G007600.1 | Wheat | nucleus | 29.45 | 10.35 |
Protein Annotations
| EnsemblPlants:TraesCS7D01G299000.1 | EnsemblPlantsGene:TraesCS7D01G299000 | InterPro:EDR2_C | PANTHER:PTHR12136 | PANTHER:PTHR12136:SF61 | PFAM:PF07059 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr7D:+:378850327..378851471
Molecular Weight (calculated)
33854.3 Da
IEP (calculated)
5.074
GRAVY (calculated)
-0.231
Length
309 amino acids
Sequence
(BLAST)
(BLAST)
001: MACSDGEAEH QWIQNVKSGG AVPCLPPENC PNGWATPPGD TFMVRGPEYF ATKAKIPGGE YLLKPLGVDW IKGPVKICEV LKNRNHRVRK AIDEEVSHGN
101: KPFVWAFNLQ LPSKENYSAI FYFVSLEPAP EGSLMDQFLK GDDALRKSRL KLIANIVKGP WIVRKAVGEQ AICILGRALS CKYVEGSNFI EVDVDIGSSI
201: VANAIVHLAF GYVATLTIDL AFVIESQAES ELPERLLGAV RFSELSPGSA GVYEVPSEEQ QEIAPILPSR LWRSFSQLLQ NPGNSMQPSP SSENTNGNFH
301: KEDAGNNDN
101: KPFVWAFNLQ LPSKENYSAI FYFVSLEPAP EGSLMDQFLK GDDALRKSRL KLIANIVKGP WIVRKAVGEQ AICILGRALS CKYVEGSNFI EVDVDIGSSI
201: VANAIVHLAF GYVATLTIDL AFVIESQAES ELPERLLGAV RFSELSPGSA GVYEVPSEEQ QEIAPILPSR LWRSFSQLLQ NPGNSMQPSP SSENTNGNFH
301: KEDAGNNDN
001: MAGSVGEETE PEWIKRVKLE GAVPCLKPDD NCKNGWTTPS PDTFMVRGPK YFSDKVKIPA GDFLLKPLGF DWIKGPKKLS EILSYPSSRI RKVIDEEFQK
101: DGTKPFVWAF NLQLPHKDNY SAVAYFVTTE PILEGSLMDR FLKGDDGFKK SRLKLIANIV KGPWIVRKAV GEQAICVIGR ALSCKYVSGE NFVEIDVDIG
201: SSMVASAIVH LAFGYVTTLT VDLAFLIESQ TEAELPEKLL GAVRFSELQT ESATSIELSS STSNDQWDQT TSERSSWWKS IGNGFSNLLN QDTANMNNTS
301: HGDIQKDEHV QKQ
101: DGTKPFVWAF NLQLPHKDNY SAVAYFVTTE PILEGSLMDR FLKGDDGFKK SRLKLIANIV KGPWIVRKAV GEQAICVIGR ALSCKYVSGE NFVEIDVDIG
201: SSMVASAIVH LAFGYVTTLT VDLAFLIESQ TEAELPEKLL GAVRFSELQT ESATSIELSS STSNDQWDQT TSERSSWWKS IGNGFSNLLN QDTANMNNTS
301: HGDIQKDEHV QKQ
Arabidopsis Description
Protein of unknown function (DUF1336) [Source:TAIR;Acc:AT1G06050]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.