Factsheet for Os06t0116500-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 3
cytosol 2
plastid 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	plastid
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os10t0455900-01	Rice	plasma membrane	44.54	51.75
TraesCS4A01G437200.1	Wheat	plastid	84.97	40.81
TraesCS7D01G045000.1	Wheat	cytosol, nucleus, plastid	84.7	40.52
TraesCS7A01G050100.1	Wheat	nucleus	83.06	39.95
Zm00001d035973_P005	Maize	nucleus, plastid	79.78	39.04
EER89092	Sorghum	nucleus	78.69	38.4
HORVU7Hr1G008800.4	Barley	plastid	84.43	36.96
Os02t0102800-01	Rice	plasma membrane	73.77	33.58
Os08t0439100-01	Rice	plasma membrane	20.77	9.96
Os09t0107600-00	Rice	extracellular	0.55	2.25
Os08t0152600-01	Rice	cytosol	1.91	1.94
Os10t0479800-01	Rice	cytosol	0.0	0.0

Protein Annotations

Gene3D:2.30.29.30	Gene3D:3.30.530.20	MapMan:35.1	ProteinID:BAF18535.1	ProteinID:BAS95850.1	ncoils:Coil
GO:GO:0003674	GO:GO:0005488	GO:GO:0008289	InterPro:IPR001849	InterPro:IPR002913	InterPro:IPR011993
InterPro:IPR023393	EnsemblPlantsGene:Os06g0116500	EnsemblPlants:Os06t0116500-01	PFAM:PF01852	InterPro:PH-like_dom_sf	InterPro:PH_domain
PFscan:PS50003	PFscan:PS50848	PANTHER:PTHR12136	PANTHER:PTHR12136:SF63	UniProt:Q0DF38	SMART:SM00233
SUPFAM:SSF50729	SUPFAM:SSF55961	InterPro:START-like_dom_sf	InterPro:START_lipid-bd_dom	UniParc:UPI0000E12648	SEG:seg

Description

Pleckstrin homology-type domain containing protein. (Os06t0116500-01)

Coordinates

chr6:+:913426..921695

Molecular Weight (calculated)

41977.0 Da

IEP (calculated)

8.004

GRAVY (calculated)

-0.554

Length

366 amino acids

Sequence
(BLAST)

001: MMMSSSTSRR EAAAKSSELG RAGGVDPPRP SAAAMARSGE LPKVSAAATA AVRHEGWMLR YGRRKIGRSF VRTRYFVLDN KLLAYYKKQP KDNMVPVKAL
101: QIDGNCRVED RGLKTHHGQM VYVLCIYNKK EKENHITMGA HDIEDALVWK KKLELLIDQQ QDTMTAKNRK AFASLDFDME FGGPLSFSDR DSGPEDEEEP
201: RPTLLRRTTI GNGPPDSVHD WTKEPDIGLS DQNDTNHAYS RKNWRLLRCQ NGLRIFEELV EVEYLARSCS RAMRAVGVVE ATCESIFGLI MSMDVTRYEW
301: DCSFQYGSLV EEVDGHTAIL YHRLQLNWFS MLVWPRDLCY VRYWRRNDDG SYGNLWMSPC WSLSSF

Best Arabidopsis Sequence Match ( AT4G19040.1 )
(BLAST)

001: MSKVVYEGWM VRYGRRKIGR SYIHMRYFVL EPRLLAYYKK KPQDYQVPIK TMLIDGNCRV EDRGLKTHHG HMVYVLSVYN KKEKSHRITM AAFNIQEALM
101: WKEKIESVID QHQESQVPNG QQYVSFEYKS GMDTGRTASS SDHESQFSAA EDEEDSRRSL MRRTTIGNGP PESVLDWTKE FDAELANQNS DNQAFSRKHW
201: RLLQCQNGLR IFEELLEVDY LPRSCSRAMK AVGVVEATCE EIFELLMSMD GTRYEWDCSF QFGSLVEEVD GHTAVLYHRL LLDWFPMIVW PRDLCYVRYW
301: RRNDDGSYVV LFRSREHENC GPQPGCVRAH LESGGYNISP LKPRNGRPRT QVQHLIQIDL KGWGAGYLPA FQQHCLLQML NSVAGLREWF SQTDERGVHT
401: RIPVMVNMAS SSLSLTKSGK SLHKSAFSLD QTNSVNRNSL LMDEDSDDDD EFQIAESEQE PETSKPETDV KRPEEEPAHN IDLSCFSGNL KRNENENARN
501: CWRISDGNNF KVRGKNFGQE KRKIPAGKHL MDLVAVDWFK DSKRIDHVAR RKGCAAQVAA EKGLFSMVVN VQVPGSTHYS MVFYFVMKEL VPGSLLQRFV
601: DGDDEFRNSR LKLIPLVPKG SWIVRQSVGS TPCLLGKAVD CNYIRGPTYL EIDVDIGSST VANGVLGLVI GVITSLVVEM AFLVQANTAE EQPERLIGAV
701: RVSHIELSSA IVPNLESE

Arabidopsis Description

EDR2ENHANCED DISEASE RESISTANCE 2 [Source:TAIR;Acc:AT4G19040]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.