CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra013371.1-P	Field mustard	mitochondrion	99.58	99.58
CDX78916	Canola	mitochondrion	99.58	99.58
CDY01578	Canola	mitochondrion	96.52	96.79
CDX98603	Canola	mitochondrion	95.82	95.82
AT4G19040.2	Thale cress	mitochondrion	94.99	94.33
CDY13045	Canola	mitochondrion	88.58	88.58
CDY23114	Canola	mitochondrion	88.3	88.3
KRG90499	Soybean	extracellular	8.36	82.19
VIT_02s0033g00080.t01	Wine grape	mitochondrion	79.81	80.7
KRH76356	Soybean	mitochondrion	80.36	79.37
KRH39650	Soybean	mitochondrion	80.22	79.34
Solyc12g096050.1.1	Tomato	mitochondrion	78.55	77.9
GSMUA_Achr5P17990_001	Banana	mitochondrion	75.91	74.86
VIT_02s0033g00120.t01	Wine grape	cytosol	76.04	74.39
Solyc08g005410.2.1	Tomato	cytosol	72.84	73.77
PGSC0003DMT400047520	Potato	cytosol	72.84	73.25
VIT_02s0033g00160.t01	Wine grape	cytosol, extracellular	14.07	72.14
EER94411	Sorghum	cytosol, nucleus, plastid	73.4	72.09
TraesCS7D01G523200.2	Wheat	plastid	72.28	71.59
TraesCS7B01G458700.1	Wheat	cytosol, plastid	72.01	71.31
GSMUA_Achr11P...	Banana	mitochondrion	74.65	70.71
HORVU7Hr1G117780.12	Barley	plastid	71.87	69.45
TraesCS7A01G538600.2	Wheat	cytosol, plastid	72.42	68.97
Zm00001d014442_P007	Maize	cytosol, nucleus, plasma membrane, plastid	65.46	64.92
VIT_15s0107g00410.t01	Wine grape	cytosol	49.58	64.14
Os10t0455900-01	Rice	plasma membrane	27.86	63.49
CDY41767	Canola	extracellular, golgi	5.29	40.0
CDX70368	Canola	cytosol, mitochondrion, nucleus, plastid	16.02	37.95
CDX78399	Canola	nucleus, plastid	15.88	37.62
CDY64695	Canola	cytosol, golgi, nucleus	14.76	33.33
CDX88150	Canola	cytosol	13.09	33.33
CDY05382	Canola	cytosol	12.26	32.71
CDX80479	Canola	cytoskeleton, cytosol, nucleus	13.23	32.42
CDY04553	Canola	cytosol	32.17	31.6
CDX71361	Canola	cytosol	32.17	31.51
CDY47711	Canola	cytosol	12.95	30.19
CDX88148	Canola	cytosol	11.0	29.92
CDX67608	Canola	cytosol	29.8	29.64
CDY07523	Canola	cytosol	29.67	29.5
CDX78263	Canola	cytosol	29.39	29.22
CDX73448	Canola	cytosol	29.39	29.22
CDY02892	Canola	cytosol	29.25	28.97
CDX80480	Canola	cytosol	8.08	28.29
CDY58454	Canola	cytosol	29.25	27.42
CDY41766	Canola	nucleus	29.11	26.66
CDY69875	Canola	cytosol	14.76	22.94
CDY10168	Canola	nucleus	13.23	16.84
CDX98605	Canola	cytosol	3.48	5.42
CDY47710	Canola	nucleus	0.0	0.0

Protein Annotations

Gene3D:2.30.29.30	Gene3D:3.30.530.20	MapMan:35.1	GO:A0A078EEY7	EnsemblPlants:CDX99399	ProteinID:CDX99399
ProteinID:CDX99399.1	InterPro:EDR2_C	GO:GO:0003674	GO:GO:0005488	GO:GO:0008289	EnsemblPlantsGene:GSBRNA2T00107722001
InterPro:IPR001849	InterPro:IPR002913	InterPro:IPR011993	InterPro:IPR023393	PFAM:PF01852	PFAM:PF07059
InterPro:PH-like_dom_sf	InterPro:PH_domain	PFscan:PS50003	PFscan:PS50848	PANTHER:PTHR12136	PANTHER:PTHR12136:SF47
SMART:SM00233	SMART:SM00234	SUPFAM:SSF50729	SUPFAM:SSF55961	InterPro:START-like_dom_sf	InterPro:START_lipid-bd_dom
UniParc:UPI0004EF23CB	SEG:seg	:	:	:	:

Description

BnaC01g11530D

Coordinates

chrLK031910:+:438098..444071

Molecular Weight (calculated)

81597.8 Da

IEP (calculated)

6.735

GRAVY (calculated)

-0.473

Length

718 amino acids

Sequence
(BLAST)

001: MSKVVYEGWM VRYGRRKIGR SYIHMRYFVL EPRLLAYYKK KPQDYQVPIK TMLIDGNCRV EDRGLKTHHG HMVYVLSVYN KKEKHHRITM AAFNIQEALM
101: WKEKIESVID QHQESQVPNG QQYVSFEYKS GMDSGRTASS SDHESQFSAP EGEDGSRRSL MRRTTIGNGP PESVLDWTKE FDAELANQNS DNQAFSRKHW
201: RLLQCQNGLR IFEELLEVDY LPRSCSRAMK AVGVVEATCE EVFELVMSMD GTRYEWDCSF QYGSLVEEVD GHTAVLYHRL LLDWFPMVVW PRDLCYVRYW
301: RRNDDGSYVV LFRSREHDNC GPQPGCVRAH LESGGYNIAP LKPRNGRPRT QVQHLIQIDL KGWGAGYLPA FQQHCLLQML NSVAGLREWF SQTDERGVHT
401: RIPVMVNMAS SSLSLSKSGR SVHQSAFSVD QTNSANRNSV LLDEDSDDDD EFQIAESEQE PETSKTETDV KKTEEEPAHN IDLSCFSGNL KRNENENARN
501: CWRTSDGSNF KVRSKSFCDD KRKIPAGKHL MDLVAVDWFK DSKRIDHVAR RKGCAAQVAA EKGLFSMVVN VQVPGSTHYS MVFYFVTKEL VPGSLLQRFV
601: DGDDEFRNSR LKLIPQVPKG SWIVRQSVGS TPCLLGKAVD CNYIRGPTYL EIDVDIGSST VANGVLGLVI GVITSLVVEM AFLVQANTPE ELPERLIGAV
701: RVSHIELSSA IVPNLESD

Best Arabidopsis Sequence Match ( AT4G19040.1 )
(BLAST)

001: MSKVVYEGWM VRYGRRKIGR SYIHMRYFVL EPRLLAYYKK KPQDYQVPIK TMLIDGNCRV EDRGLKTHHG HMVYVLSVYN KKEKSHRITM AAFNIQEALM
101: WKEKIESVID QHQESQVPNG QQYVSFEYKS GMDTGRTASS SDHESQFSAA EDEEDSRRSL MRRTTIGNGP PESVLDWTKE FDAELANQNS DNQAFSRKHW
201: RLLQCQNGLR IFEELLEVDY LPRSCSRAMK AVGVVEATCE EIFELLMSMD GTRYEWDCSF QFGSLVEEVD GHTAVLYHRL LLDWFPMIVW PRDLCYVRYW
301: RRNDDGSYVV LFRSREHENC GPQPGCVRAH LESGGYNISP LKPRNGRPRT QVQHLIQIDL KGWGAGYLPA FQQHCLLQML NSVAGLREWF SQTDERGVHT
401: RIPVMVNMAS SSLSLTKSGK SLHKSAFSLD QTNSVNRNSL LMDEDSDDDD EFQIAESEQE PETSKPETDV KRPEEEPAHN IDLSCFSGNL KRNENENARN
501: CWRISDGNNF KVRGKNFGQE KRKIPAGKHL MDLVAVDWFK DSKRIDHVAR RKGCAAQVAA EKGLFSMVVN VQVPGSTHYS MVFYFVMKEL VPGSLLQRFV
601: DGDDEFRNSR LKLIPLVPKG SWIVRQSVGS TPCLLGKAVD CNYIRGPTYL EIDVDIGSST VANGVLGLVI GVITSLVVEM AFLVQANTAE EQPERLIGAV
701: RVSHIELSSA IVPNLESE

Arabidopsis Description

EDR2ENHANCED DISEASE RESISTANCE 2 [Source:TAIR;Acc:AT4G19040]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.