Factsheet for Os12t0456200-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6
golgi 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES03242	Sorghum	mitochondrion	77.69	76.52
Zm00001d044417_P001	Maize	mitochondrion	75.38	75.68
HORVU7Hr1G043340.3	Barley	mitochondrion	71.92	72.2
TraesCS7A01G213900.1	Wheat	mitochondrion	72.31	72.03
TraesCS7B01G121200.1	Wheat	mitochondrion	71.15	70.88
TraesCS7D01G216000.3	Wheat	mitochondrion	71.15	68.27
AT5G06410.1	Thale cress	plastid	48.46	50.0
VIT_08s0032g00960.t01	Wine grape	mitochondrion, plastid	50.0	48.69
CDY57992	Canola	mitochondrion, nucleus, plastid	48.46	47.73
Solyc01g006860.2.1	Tomato	mitochondrion, plastid	48.85	47.57
KRH32887	Soybean	mitochondrion	48.46	47.55
PGSC0003DMT400054981	Potato	mitochondrion	48.85	47.39
CDX98921	Canola	nucleus, plastid	48.85	47.39
Bra009192.1-P	Field mustard	mitochondrion, nucleus, plastid	48.08	47.17
KRH72132	Soybean	mitochondrion	47.69	46.62
Bra005895.1-P	Field mustard	mitochondrion, plastid	46.15	45.28
CDY55759	Canola	mitochondrion, plastid	45.77	44.74
GSMUA_Achr9P25930_001	Banana	cytosol	55.38	42.86

Protein Annotations

Gene3D:1.10.287.110	Gene3D:1.20.1280.20	EntrezGene:4352172	MapMan:7.11.2.2.6	ProteinID:ABA98364.1	EMBL:AK069528
ProteinID:BAF29748.1	ProteinID:BAT17036.1	InterPro:DnaJ_domain	ProteinID:EAZ20399.1	GO:GO:0001671	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016043
GO:GO:0019538	GO:GO:0030234	GO:GO:0032781	GO:GO:0051087	GO:GO:0051259	GO:GO:0055072
GO:GO:0097428	InterPro:HscB	InterPro:HscB_C_sf	InterPro:HscB_oligo_C	InterPro:IPR001623	InterPro:IPR036386
InterPro:IPR036869	InterPro:J_dom_sf	EnsemblPlantsGene:Os12g0456200	EnsemblPlants:Os12t0456200-01	PFAM:PF07743	PFscan:PS50076
PANTHER:PTHR14021	PANTHER:PTHR14021:SF15	UniProt:Q2QRM4	SMART:SM00271	SUPFAM:SSF46565	SUPFAM:SSF47144
TIGRFAMs:TIGR00714	UniParc:UPI0000681216	RefSeq:XP_015620522.1	SEG:seg	:	:

Description

IRON-SULFUR CLUSTER PROTEIN 26Heat shock cognate protein B, C-terminal oligomerisation domain containing protein. (Os12t0456200-01)

Coordinates

chr12:-:15848621..15851558

Molecular Weight (calculated)

29052.3 Da

IEP (calculated)

8.868

GRAVY (calculated)

-0.614

Length

260 amino acids

Sequence
(BLAST)

001: MWRRPGQLRL HLAAAAGAAG RGARRRNPLP PVPTVPSSSS SSSASTTTTR DLAAFARGSS SSSRSLSDRA GGGECWSCGA SGAFLSCGSC GSVQPVDPAV
101: DYFRIFGLER EYTIKDNNLE GKYKDWQKKL HPDLVHSKSE KERAFAAEQS ALVIDAYRTL SKPLSRALYL LQLEGIPIDE EKTITDPELL MEMMEIREAV
201: NDANDSQTLE KIQSQIKRKL ETWSHSFQEA FERRDFDRAV KATQRMRYYE RAVEETIKKL

Best Arabidopsis Sequence Match ( AT5G06410.1 )
(BLAST)

001: MKKTKTMVAS ISTLIRRTYP STNQCNSLAT IQSQTQLPRE SLQHHSSAEG RLRFSGRVFC SESGAGCWNC GEKAAFLFCN SCRSIQPVDD SVDYFQIFGL
101: EKKYEIDPGS LEGKYKDWQK KLHPDLVHNK SKKERDYAAE QSAKVTEACR TLTKRLSRAM YIMKLNGVNV NEEETITDPT LLMEIMELRE AISEADDSTS
201: LNQIRSQVQE KLKQWSDSFV EAFESQKFDD AVKCIQRMTY YERACEEILK KL

Arabidopsis Description

DNAJ heat shock N-terminal domain-containing protein [Source:UniProtKB/TrEMBL;Acc:Q8L7K4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.