Factsheet for Bra009192.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, nucleus

Predictor Summary:

plastid 3
mitochondrion 4
nucleus 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY57992	Canola	mitochondrion, nucleus, plastid	94.72	95.08
Bra005895.1-P	Field mustard	mitochondrion, plastid	75.09	75.09
AT5G06410.1	Thale cress	plastid	68.3	71.83
VIT_08s0032g00960.t01	Wine grape	mitochondrion, plastid	50.94	50.56
PGSC0003DMT400054981	Potato	mitochondrion	49.81	49.25
Solyc01g006860.2.1	Tomato	mitochondrion, plastid	49.43	49.06
HORVU7Hr1G043340.3	Barley	mitochondrion	47.92	49.03
KRH32887	Soybean	mitochondrion	48.68	48.68
KRH72132	Soybean	mitochondrion	48.68	48.5
Os12t0456200-01	Rice	mitochondrion	47.17	48.08
TraesCS7B01G121200.1	Wheat	mitochondrion	47.17	47.89
TraesCS7A01G213900.1	Wheat	mitochondrion	46.79	47.51
Zm00001d044417_P001	Maize	mitochondrion	46.42	47.49
EES03242	Sorghum	mitochondrion	46.04	46.21
TraesCS7D01G216000.3	Wheat	mitochondrion	47.17	46.13
GSMUA_Achr9P25930_001	Banana	cytosol	45.66	36.01

Protein Annotations

Gene3D:1.10.287.110	Gene3D:1.20.1280.20	MapMan:7.11.2.2.6	EnsemblPlantsGene:Bra009192	EnsemblPlants:Bra009192.1	EnsemblPlants:Bra009192.1-P
InterPro:DnaJ_domain	GO:GO:0001671	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016043	GO:GO:0019538	GO:GO:0030234	GO:GO:0032781
GO:GO:0051087	GO:GO:0051259	GO:GO:0097428	InterPro:HscB	InterPro:HscB_C_sf	InterPro:HscB_oligo_C
InterPro:IPR001623	InterPro:IPR036386	InterPro:IPR036869	InterPro:J_dom_sf	UniProt:M4CY95	PFAM:PF07743
PFscan:PS50076	PANTHER:PTHR14021	PANTHER:PTHR14021:SF15	SUPFAM:SSF46565	SUPFAM:SSF47144	TIGRFAMs:TIGR00714
UniParc:UPI0002544FF3	SEG:seg	:	:	:	:

Description

AT5G06410 (E=1e-094) | DNAJ heat shock N-terminal domain-containing protein

Coordinates

chrA10:-:15593895..15595214

Molecular Weight (calculated)

30713.1 Da

IEP (calculated)

8.106

GRAVY (calculated)

-0.742

Length

265 amino acids

Sequence
(BLAST)

001: MNRARKLVAS ISTLSTRRRT YSPSSTFRTI SINSQTHHSS RRESFQPSSS SAKPLWLRFS GREFSSGSSD TTSSSVCWNC GFLSEKAAFL FCESCRSIQP
101: IDDSVDYFQI FDLEKKYELD AGSLEGKYKD WQKKLHPDLV HNKSQKERDY AADQSAKVTE AYRTLTKRLS RAMYIMKLNG KNVNEEETIT DPTLLMEIME
201: LRETIAEAND SKELDQIRSQ VQEKLKQWSD SFVEAFESQR FDEAVKCIQR MTYYERACEE IVKKL

Best Arabidopsis Sequence Match ( AT5G06410.1 )
(BLAST)

001: MKKTKTMVAS ISTLIRRTYP STNQCNSLAT IQSQTQLPRE SLQHHSSAEG RLRFSGRVFC SESGAGCWNC GEKAAFLFCN SCRSIQPVDD SVDYFQIFGL
101: EKKYEIDPGS LEGKYKDWQK KLHPDLVHNK SKKERDYAAE QSAKVTEACR TLTKRLSRAM YIMKLNGVNV NEEETITDPT LLMEIMELRE AISEADDSTS
201: LNQIRSQVQE KLKQWSDSFV EAFESQKFDD AVKCIQRMTY YERACEEILK KL

Arabidopsis Description

DNAJ heat shock N-terminal domain-containing protein [Source:UniProtKB/TrEMBL;Acc:Q8L7K4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.