Factsheet for TraesCS7D01G216000.3

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G121200.1	Wheat	mitochondrion	93.73	97.32
TraesCS7A01G213900.1	Wheat	mitochondrion	92.25	95.79
HORVU7Hr1G043340.3	Barley	mitochondrion	87.82	91.89
EES03242	Sorghum	mitochondrion	70.48	72.35
Os12t0456200-01	Rice	mitochondrion	68.27	71.15
Zm00001d044417_P001	Maize	mitochondrion	67.53	70.66
AT5G06410.1	Thale cress	plastid	45.76	49.21
KRH32887	Soybean	mitochondrion	47.6	48.68
VIT_08s0032g00960.t01	Wine grape	mitochondrion, plastid	47.23	47.94
CDY57992	Canola	mitochondrion, nucleus, plastid	46.49	47.73
CDX98921	Canola	nucleus, plastid	46.86	47.39
Bra009192.1-P	Field mustard	mitochondrion, nucleus, plastid	46.13	47.17
KRH72132	Soybean	mitochondrion	46.13	46.99
Bra005895.1-P	Field mustard	mitochondrion, plastid	45.02	46.04
CDY55759	Canola	mitochondrion, plastid	44.28	45.11
PGSC0003DMT400054981	Potato	mitochondrion	43.91	44.4
Solyc01g006860.2.1	Tomato	mitochondrion, plastid	43.54	44.19
GSMUA_Achr9P25930_001	Banana	cytosol	50.18	40.48

Protein Annotations

Gene3D:1.10.287.110	Gene3D:1.20.1280.20	MapMan:7.11.2.2.6	InterPro:DnaJ_domain	GO:GO:0001671	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016043
GO:GO:0019538	GO:GO:0030234	GO:GO:0051087	GO:GO:0051259	GO:GO:0055072	GO:GO:0097428
InterPro:HscB	InterPro:HscB_C_sf	InterPro:HscB_oligo_C	InterPro:IPR001623	InterPro:IPR036386	InterPro:IPR036869
InterPro:J_dom_sf	PFAM:PF07743	PFscan:PS50076	PANTHER:PTHR14021	PANTHER:PTHR14021:SF15	SMART:SM00271
SUPFAM:SSF46565	SUPFAM:SSF47144	TIGRFAMs:TIGR00714	EnsemblPlantsGene:TraesCS7D01G216000	EnsemblPlants:TraesCS7D01G216000.3	TIGR:cd06257
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr7D:+:175920205..175922420

Molecular Weight (calculated)

30527.3 Da

IEP (calculated)

8.122

GRAVY (calculated)

-0.569

Length

271 amino acids

Sequence
(BLAST)

001: MWRRAGPICL HLSGIAGRRV RRPPQPPAPT ATCSTSAFAS SSFHHNLGTF LDSIRVPPSR SLSNQAGGDG SIGGECWSCG AKGAFLSCGS CRSVQPVDPA
101: VDYFRIFGLD RGYDVKDTNL EGKYKDWQKK LHPDLVHSKS EKERDFAAGQ SALVIEAYRT LSKPLPRALY LAFQPYQTIW QLQLEGIHVD EEKTINDPEL
201: LMEMMEIREA VSEAGDSETL KKIQSQMKRK LETWSKAFQE AFDKRDFDGA VEATQRMRYY ERAMEETVKK L

Best Arabidopsis Sequence Match ( AT5G06410.1 )
(BLAST)

001: MKKTKTMVAS ISTLIRRTYP STNQCNSLAT IQSQTQLPRE SLQHHSSAEG RLRFSGRVFC SESGAGCWNC GEKAAFLFCN SCRSIQPVDD SVDYFQIFGL
101: EKKYEIDPGS LEGKYKDWQK KLHPDLVHNK SKKERDYAAE QSAKVTEACR TLTKRLSRAM YIMKLNGVNV NEEETITDPT LLMEIMELRE AISEADDSTS
201: LNQIRSQVQE KLKQWSDSFV EAFESQKFDD AVKCIQRMTY YERACEEILK KL

Arabidopsis Description

DNAJ heat shock N-terminal domain-containing protein [Source:UniProtKB/TrEMBL;Acc:Q8L7K4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.