Factsheet for VIT_08s0032g00960.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 5
mitochondrion 4
golgi 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH32887	Soybean	mitochondrion	56.93	57.36
KRH72132	Soybean	mitochondrion	54.68	54.89
AT5G06410.1	Thale cress	plastid	50.56	53.57
CDY57992	Canola	mitochondrion, nucleus, plastid	51.31	51.89
EES03242	Sorghum	mitochondrion	50.94	51.52
PGSC0003DMT400054981	Potato	mitochondrion	51.69	51.49
Zm00001d044417_P001	Maize	mitochondrion	49.81	51.35
Solyc01g006860.2.1	Tomato	mitochondrion, plastid	51.31	51.31
Bra009192.1-P	Field mustard	mitochondrion, nucleus, plastid	50.56	50.94
HORVU7Hr1G043340.3	Barley	mitochondrion	49.06	50.58
Os12t0456200-01	Rice	mitochondrion	48.69	50.0
TraesCS7B01G121200.1	Wheat	mitochondrion	48.69	49.81
CDX98921	Canola	nucleus, plastid	49.81	49.63
CDY55759	Canola	mitochondrion, plastid	49.44	49.62
TraesCS7A01G213900.1	Wheat	mitochondrion	48.31	49.43
Bra005895.1-P	Field mustard	mitochondrion, plastid	48.69	49.06
TraesCS7D01G216000.3	Wheat	mitochondrion	47.94	47.23
GSMUA_Achr9P25930_001	Banana	cytosol	52.06	41.37

Protein Annotations

Gene3D:1.10.287.110	Gene3D:1.20.1280.20	EntrezGene:100254709	wikigene:100254709	MapMan:7.11.2.2.6	ProteinID:CBI39120
ProteinID:CBI39120.3	UniProt:D7U8Q6	InterPro:DnaJ_domain	EMBL:FN596742	GO:GO:0001671	GO:GO:0003674
GO:GO:0003824	GO:GO:0003843	GO:GO:0005488	GO:GO:0005515	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016043	GO:GO:0016740	GO:GO:0019538	GO:GO:0030234	GO:GO:0032781
GO:GO:0051087	GO:GO:0051259	GO:GO:0097428	InterPro:HscB	InterPro:HscB_C_sf	InterPro:HscB_oligo_C
InterPro:IPR001623	InterPro:IPR036386	InterPro:IPR036869	InterPro:J_dom_sf	EntrezGene:LOC100254709	wikigene:LOC100254709
HAMAP:MF_00682	PFAM:PF00226	PFAM:PF07743	PFscan:PS50076	PANTHER:PTHR14021	PANTHER:PTHR14021:SF15
SMART:SM00271	SUPFAM:SSF46565	SUPFAM:SSF47144	TIGR:TC56763	TIGRFAMs:TIGR00714	UniParc:UPI00015CA924
ArrayExpress:VIT_08s0032g00960	EnsemblPlantsGene:VIT_08s0032g00960	EnsemblPlants:VIT_08s0032g00960.t01	unigene:Vvi.7364	RefSeq:XP_002270858	RefSeq:XP_002270858.1
RefSeq:XP_003632561	RefSeq:XP_003632561.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr8:+:4909037..4919266

Molecular Weight (calculated)

30795.4 Da

IEP (calculated)

6.152

GRAVY (calculated)

-0.439

Length

267 amino acids

Sequence
(BLAST)

001: MWKKNLWTPL SPILRRRFPS FSLNSTLNIP SSTIFSSPCS STAQYSRVFW SSSYDFLGSL KFSRKLCSAQ SAEQVHVRCW NCKAAAQTTP FLACDSCRSV
101: QPVDPSVDYF QIFGLEKKYE LEDNNLEGKY KDWQKKLHPD LVHSKSEEEK EYAAEQSARV IDAYQTLSKP LARAIYILKL EGVDFDEEQT ISDISFLAEI
201: MEIREAVEEA VNSETLLQIQ SQVQEKLKHW SQSFSNAFQS GKFEEAVISV QRMTYYVRVN DEIMKKL

Best Arabidopsis Sequence Match ( AT5G06410.1 )
(BLAST)

001: MKKTKTMVAS ISTLIRRTYP STNQCNSLAT IQSQTQLPRE SLQHHSSAEG RLRFSGRVFC SESGAGCWNC GEKAAFLFCN SCRSIQPVDD SVDYFQIFGL
101: EKKYEIDPGS LEGKYKDWQK KLHPDLVHNK SKKERDYAAE QSAKVTEACR TLTKRLSRAM YIMKLNGVNV NEEETITDPT LLMEIMELRE AISEADDSTS
201: LNQIRSQVQE KLKQWSDSFV EAFESQKFDD AVKCIQRMTY YERACEEILK KL

Arabidopsis Description

DNAJ heat shock N-terminal domain-containing protein [Source:UniProtKB/TrEMBL;Acc:Q8L7K4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.