CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 6
golgi 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH72132	Soybean	mitochondrion	81.13	80.83
VIT_08s0032g00960.t01	Wine grape	mitochondrion, plastid	57.36	56.93
AT5G06410.1	Thale cress	plastid	49.06	51.59
Solyc01g006860.2.1	Tomato	mitochondrion, plastid	50.94	50.56
PGSC0003DMT400054981	Potato	mitochondrion	50.57	50.0
TraesCS7B01G121200.1	Wheat	mitochondrion	48.68	49.43
CDY57992	Canola	mitochondrion, nucleus, plastid	49.06	49.24
HORVU7Hr1G043340.3	Barley	mitochondrion	47.92	49.03
Bra009192.1-P	Field mustard	mitochondrion, nucleus, plastid	48.68	48.68
Os12t0456200-01	Rice	mitochondrion	47.55	48.46
TraesCS7A01G213900.1	Wheat	mitochondrion	47.55	48.28
CDY55759	Canola	mitochondrion, plastid	48.3	48.12
Zm00001d044417_P001	Maize	mitochondrion	46.79	47.88
TraesCS7D01G216000.3	Wheat	mitochondrion	48.68	47.6
EES03242	Sorghum	mitochondrion	47.17	47.35
Bra005895.1-P	Field mustard	mitochondrion, plastid	47.17	47.17
CDX98921	Canola	nucleus, plastid	47.17	46.64
GSMUA_Achr9P25930_001	Banana	cytosol	47.92	37.8

Protein Annotations

Gene3D:1.10.287.110	Gene3D:1.20.1280.20	EntrezGene:100798830	MapMan:7.11.2.2.6	EMBL:ACUP02006195	InterPro:DnaJ_domain
EnsemblPlantsGene:GLYMA_10G083800	GO:GO:0001671	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016043	GO:GO:0019538	GO:GO:0030234	GO:GO:0032781
GO:GO:0051087	GO:GO:0051259	GO:GO:0097428	InterPro:HscB	InterPro:HscB_C_sf	InterPro:HscB_oligo_C
UniProt:I1L9M4	InterPro:IPR001623	InterPro:IPR036386	InterPro:IPR036869	InterPro:J_dom_sf	EnsemblPlants:KRH32887
ProteinID:KRH32887	ProteinID:KRH32887.1	PFAM:PF07743	PFscan:PS50076	PANTHER:PTHR14021	PANTHER:PTHR14021:SF15
SMART:SM00271	SUPFAM:SSF46565	SUPFAM:SSF47144	TIGRFAMs:TIGR00714	UniParc:UPI000233D3C4	SEG:seg

Description

hypothetical protein

Coordinates

chr10:+:10402394..10408007

Molecular Weight (calculated)

30695.2 Da

IEP (calculated)

6.181

GRAVY (calculated)

-0.564

Length

265 amino acids

Sequence
(BLAST)

001: MSKNKLCTPL STLLRRTLTS FPQHFTSNFS QIKLSLHDSS LPFAPPSHNP TCDYYYSLGF FRKSLCSKSA EEIQRGCWNC HTVPHSEPFL VCESCRCIQP
101: VDSSVDYFDI FGVERKYDIE GENLEGKYKD WQKKLHPDLV HSKSQKERDF AAEQSARVID AYRTLSKPLS RGIYLLKLYG EEVDEEQTIS DSELLAEILE
201: IREAVEEATN SETLNHILSE MQEKLHNWSN AFGHAFQSQN FEEAKMAIRR MTYYSRVIDE VVKKL

Best Arabidopsis Sequence Match ( AT5G06410.1 )
(BLAST)

001: MKKTKTMVAS ISTLIRRTYP STNQCNSLAT IQSQTQLPRE SLQHHSSAEG RLRFSGRVFC SESGAGCWNC GEKAAFLFCN SCRSIQPVDD SVDYFQIFGL
101: EKKYEIDPGS LEGKYKDWQK KLHPDLVHNK SKKERDYAAE QSAKVTEACR TLTKRLSRAM YIMKLNGVNV NEEETITDPT LLMEIMELRE AISEADDSTS
201: LNQIRSQVQE KLKQWSDSFV EAFESQKFDD AVKCIQRMTY YERACEEILK KL

Arabidopsis Description

DNAJ heat shock N-terminal domain-containing protein [Source:UniProtKB/TrEMBL;Acc:Q8L7K4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.