CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 3
mitochondrion 4
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra005895.1-P	Field mustard	mitochondrion, plastid	94.74	95.09
CDY57992	Canola	mitochondrion, nucleus, plastid	75.94	76.52
CDX98921	Canola	nucleus, plastid	76.32	75.75
AT5G06410.1	Thale cress	plastid	66.92	70.63
PGSC0003DMT400054981	Potato	mitochondrion	50.75	50.37
VIT_08s0032g00960.t01	Wine grape	mitochondrion, plastid	49.62	49.44
Solyc01g006860.2.1	Tomato	mitochondrion, plastid	49.62	49.44
KRH32887	Soybean	mitochondrion	48.12	48.3
KRH72132	Soybean	mitochondrion	47.37	47.37
HORVU7Hr1G043340.3	Barley	mitochondrion	45.49	46.72
Zm00001d044417_P001	Maize	mitochondrion	45.49	46.72
Os12t0456200-01	Rice	mitochondrion	44.74	45.77
TraesCS7A01G213900.1	Wheat	mitochondrion	44.36	45.21
TraesCS7B01G121200.1	Wheat	mitochondrion	44.36	45.21
EES03242	Sorghum	mitochondrion	44.74	45.08
TraesCS7D01G216000.3	Wheat	mitochondrion	45.11	44.28
GSMUA_Achr9P25930_001	Banana	cytosol	45.86	36.31

Protein Annotations

Gene3D:1.10.287.110	Gene3D:1.20.1280.20	MapMan:7.11.2.2.6	GO:A0A078IZ69	UniProt:A0A078IZ69	EnsemblPlants:CDY55759
ProteinID:CDY55759	ProteinID:CDY55759.1	InterPro:DnaJ_domain	GO:GO:0001671	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016043	GO:GO:0019538
GO:GO:0030234	GO:GO:0032781	GO:GO:0051087	GO:GO:0051259	GO:GO:0097428	EnsemblPlantsGene:GSBRNA2T00017321001
InterPro:HscB	InterPro:HscB_C_sf	InterPro:HscB_oligo_C	InterPro:IPR001623	InterPro:IPR036386	InterPro:IPR036869
InterPro:J_dom_sf	PFAM:PF07743	PFscan:PS50076	PANTHER:PTHR14021	SUPFAM:SSF46565	SUPFAM:SSF47144
TIGRFAMs:TIGR00714	UniParc:UPI0004EE904F	SEG:seg	:	:	:

Description

BnaA03g55360DBnaA03g55360D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IZ69]

Coordinates

chrLK033427:-:8149..10492

Molecular Weight (calculated)

30422.0 Da

IEP (calculated)

8.307

GRAVY (calculated)

-0.678

Length

266 amino acids

Sequence
(BLAST)

001: MNKTKKLVAS ISTLLTRRRI SHPSSSSLRC NPLATIASNS QTDLNPVKPL AVSIRRLQFS GRAFSSESSD KRSSSVCCWN CGFSSEKAAF LFCDSCRSIQ
101: PVDDSVDYFQ IFGLEKKYEL EGGSLEGKYK DWQKKLHPDL VHNKSQKERD YAADQSAKVT EACRTLTKRL SRAMYKMKLN GKNINEEETV TDPTLLMEMM
201: ELREAIAEAD DSKELNQIQS QVQENLKQWS DSFADNFESQ RFDEAVKCIR RMTYYEKACE EIVKKL

Best Arabidopsis Sequence Match ( AT5G06410.1 )
(BLAST)

001: MKKTKTMVAS ISTLIRRTYP STNQCNSLAT IQSQTQLPRE SLQHHSSAEG RLRFSGRVFC SESGAGCWNC GEKAAFLFCN SCRSIQPVDD SVDYFQIFGL
101: EKKYEIDPGS LEGKYKDWQK KLHPDLVHNK SKKERDYAAE QSAKVTEACR TLTKRLSRAM YIMKLNGVNV NEEETITDPT LLMEIMELRE AISEADDSTS
201: LNQIRSQVQE KLKQWSDSFV EAFESQKFDD AVKCIQRMTY YERACEEILK KL

Arabidopsis Description

DNAJ heat shock N-terminal domain-containing protein [Source:UniProtKB/TrEMBL;Acc:Q8L7K4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.