Factsheet for TraesCS7A01G213900.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G121200.1	Wheat	mitochondrion	96.55	96.55
TraesCS7D01G216000.3	Wheat	mitochondrion	95.79	92.25
HORVU7Hr1G043340.3	Barley	mitochondrion	90.8	91.51
EES03242	Sorghum	mitochondrion	74.33	73.48
Zm00001d044417_P001	Maize	mitochondrion	72.03	72.59
Os12t0456200-01	Rice	mitochondrion	72.03	72.31
AT5G06410.1	Thale cress	plastid	47.51	49.21
VIT_08s0032g00960.t01	Wine grape	mitochondrion, plastid	49.43	48.31
KRH32887	Soybean	mitochondrion	48.28	47.55
CDY57992	Canola	mitochondrion, nucleus, plastid	47.89	47.35
CDX98921	Canola	nucleus, plastid	48.28	47.01
Bra009192.1-P	Field mustard	mitochondrion, nucleus, plastid	47.51	46.79
KRH72132	Soybean	mitochondrion	46.74	45.86
Bra005895.1-P	Field mustard	mitochondrion, plastid	45.98	45.28
PGSC0003DMT400054981	Potato	mitochondrion	46.36	45.15
Solyc01g006860.2.1	Tomato	mitochondrion, plastid	45.98	44.94
CDY55759	Canola	mitochondrion, plastid	45.21	44.36
GSMUA_Achr9P25930_001	Banana	cytosol	52.11	40.48

Protein Annotations

Gene3D:1.10.287.110	Gene3D:1.20.1280.20	MapMan:7.11.2.2.6	InterPro:DnaJ_domain	GO:GO:0001671	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016043
GO:GO:0019538	GO:GO:0030234	GO:GO:0051087	GO:GO:0051259	GO:GO:0055072	GO:GO:0097428
InterPro:HscB	InterPro:HscB_C_sf	InterPro:HscB_oligo_C	InterPro:IPR001623	InterPro:IPR036386	InterPro:IPR036869
InterPro:J_dom_sf	PFAM:PF07743	PFscan:PS50076	PANTHER:PTHR14021	PANTHER:PTHR14021:SF15	SMART:SM00271
SUPFAM:SSF46565	SUPFAM:SSF47144	TIGRFAMs:TIGR00714	EnsemblPlantsGene:TraesCS7A01G213900	EnsemblPlants:TraesCS7A01G213900.1	TIGR:cd06257
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr7A:+:178004617..178007894

Molecular Weight (calculated)

29090.6 Da

IEP (calculated)

8.361

GRAVY (calculated)

-0.558

Length

261 amino acids

Sequence
(BLAST)

001: MWRRAGPICL HLAGIAGRRI RRPPQPPAPT ATCSSSAFAS SSFHHNLGTF RDSIGVPPSR SLSNQAGGDG GIGGECWSCG AKGAFLSCGS CRSVQPVDPA
101: VDYFRIFGLD RGYDVKDTNL EGKYKDWQKK LHPDLVHSKS EKERDFAAGQ SALVIEAYRT LSKPLPRALY LLQLEGIHVD EEKTINDPEL LMEMMEIREA
201: VSEAGDSQTL KKIQSQMKSK LETWAKSFQE AFNKRDFDGA VEATQRMRYY ERAMEETVKK L

Best Arabidopsis Sequence Match ( AT5G06410.1 )
(BLAST)

001: MKKTKTMVAS ISTLIRRTYP STNQCNSLAT IQSQTQLPRE SLQHHSSAEG RLRFSGRVFC SESGAGCWNC GEKAAFLFCN SCRSIQPVDD SVDYFQIFGL
101: EKKYEIDPGS LEGKYKDWQK KLHPDLVHNK SKKERDYAAE QSAKVTEACR TLTKRLSRAM YIMKLNGVNV NEEETITDPT LLMEIMELRE AISEADDSTS
201: LNQIRSQVQE KLKQWSDSFV EAFESQKFDD AVKCIQRMTY YERACEEILK KL

Arabidopsis Description

DNAJ heat shock N-terminal domain-containing protein [Source:UniProtKB/TrEMBL;Acc:Q8L7K4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.