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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 4
  • mitochondrion 3
  • nucleus 2
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:mitochondrion, nucleus, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:nucleus
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:plastid
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY57992 Canola mitochondrion, nucleus, plastid 72.22 68.94
CDX98921 Canola nucleus, plastid 73.02 68.66
Bra009192.1-P Field mustard mitochondrion, nucleus, plastid 71.83 68.3
CDY55759 Canola mitochondrion, plastid 70.63 66.92
Bra005895.1-P Field mustard mitochondrion, plastid 69.84 66.42
VIT_08s0032g00960.t01 Wine grape mitochondrion, plastid 53.57 50.56
Zm00001d044417_P001 Maize mitochondrion 51.59 50.19
EES03242 Sorghum mitochondrion 51.98 49.62
PGSC0003DMT400054981 Potato mitochondrion 52.38 49.25
KRH32887 Soybean mitochondrion 51.59 49.06
HORVU7Hr1G043340.3 Barley mitochondrion 50.4 49.03
Os12t0456200-01 Rice mitochondrion 50.0 48.46
TraesCS7B01G121200.1 Wheat mitochondrion 50.0 48.28
Solyc01g006860.2.1 Tomato mitochondrion, plastid 50.4 47.57
TraesCS7A01G213900.1 Wheat mitochondrion 49.21 47.51
KRH72132 Soybean mitochondrion 49.21 46.62
TraesCS7D01G216000.3 Wheat mitochondrion 49.21 45.76
GSMUA_Achr9P25930_001 Banana cytosol 50.4 37.8
Protein Annotations
Gene3D:1.10.287.110Gene3D:1.20.1280.20MapMan:7.11.2.2.6EntrezGene:830529ProteinID:AED91011.1ArrayExpress:AT5G06410
EnsemblPlantsGene:AT5G06410RefSeq:AT5G06410TAIR:AT5G06410RefSeq:AT5G06410-TAIR-GEnsemblPlants:AT5G06410.1TAIR:AT5G06410.1
EMBL:AY128407EMBL:BT000065InterPro:DnaJ_domainGO:GO:0001671GO:GO:0003674GO:GO:0005488
GO:GO:0005515GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016043GO:GO:0019538
GO:GO:0030234GO:GO:0032781GO:GO:0051087GO:GO:0051259GO:GO:0055072GO:GO:0097428
InterPro:HscBInterPro:HscB_C_sfInterPro:HscB_oligo_CInterPro:IPR001623InterPro:IPR036386InterPro:IPR036869
InterPro:J_dom_sfRefSeq:NP_196259.2PFAM:PF07743PO:PO:0000013PO:PO:0000037PO:PO:0000230
PO:PO:0000293PO:PO:0001054PO:PO:0001078PO:PO:0001081PO:PO:0001185PO:PO:0004507
PO:PO:0007064PO:PO:0007095PO:PO:0007098PO:PO:0007103PO:PO:0007115PO:PO:0007123
PO:PO:0007611PO:PO:0007616PO:PO:0008019PO:PO:0009005PO:PO:0009006PO:PO:0009009
PO:PO:0009010PO:PO:0009025PO:PO:0009029PO:PO:0009030PO:PO:0009031PO:PO:0009032
PO:PO:0009046PO:PO:0009047PO:PO:0009052PO:PO:0020030PO:PO:0020038PO:PO:0020100
PO:PO:0020137PO:PO:0025022PO:PO:0025281PFscan:PS50076PANTHER:PTHR14021PANTHER:PTHR14021:SF15
UniProt:Q8L7K4SUPFAM:SSF46565SUPFAM:SSF47144TIGRFAMs:TIGR00714UniParc:UPI00000AC037:
Description
DNAJ heat shock N-terminal domain-containing protein [Source:UniProtKB/TrEMBL;Acc:Q8L7K4]
Coordinates
chr5:-:1959367..1961158
Molecular Weight (calculated)
28932.4 Da
IEP (calculated)
7.655
GRAVY (calculated)
-0.644
Length
252 amino acids
Sequence
(BLAST)
001: MKKTKTMVAS ISTLIRRTYP STNQCNSLAT IQSQTQLPRE SLQHHSSAEG RLRFSGRVFC SESGAGCWNC GEKAAFLFCN SCRSIQPVDD SVDYFQIFGL
101: EKKYEIDPGS LEGKYKDWQK KLHPDLVHNK SKKERDYAAE QSAKVTEACR TLTKRLSRAM YIMKLNGVNV NEEETITDPT LLMEIMELRE AISEADDSTS
201: LNQIRSQVQE KLKQWSDSFV EAFESQKFDD AVKCIQRMTY YERACEEILK KL
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.