CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, nucleus

Predictor Summary:

plastid 3
mitochondrion 4
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra009192.1-P	Field mustard	mitochondrion, nucleus, plastid	95.08	94.72
CDX98921	Canola	nucleus, plastid	89.77	88.43
CDY55759	Canola	mitochondrion, plastid	76.52	75.94
AT5G06410.1	Thale cress	plastid	68.94	72.22
VIT_08s0032g00960.t01	Wine grape	mitochondrion, plastid	51.89	51.31
PGSC0003DMT400054981	Potato	mitochondrion	50.38	49.63
Solyc01g006860.2.1	Tomato	mitochondrion, plastid	50.0	49.44
HORVU7Hr1G043340.3	Barley	mitochondrion	48.48	49.42
KRH32887	Soybean	mitochondrion	49.24	49.06
Os12t0456200-01	Rice	mitochondrion	47.73	48.46
TraesCS7B01G121200.1	Wheat	mitochondrion	47.73	48.28
KRH72132	Soybean	mitochondrion	48.48	48.12
TraesCS7A01G213900.1	Wheat	mitochondrion	47.35	47.89
Zm00001d044417_P001	Maize	mitochondrion	46.97	47.88
EES03242	Sorghum	mitochondrion	46.59	46.59
TraesCS7D01G216000.3	Wheat	mitochondrion	47.73	46.49
GSMUA_Achr9P25930_001	Banana	cytosol	46.21	36.31

Protein Annotations

Gene3D:1.10.287.110	Gene3D:1.20.1280.20	MapMan:7.11.2.2.6	GO:A0A078IZP1	UniProt:A0A078IZP1	EnsemblPlants:CDY57992
ProteinID:CDY57992	ProteinID:CDY57992.1	InterPro:DnaJ_domain	GO:GO:0001671	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016043	GO:GO:0019538
GO:GO:0030234	GO:GO:0032781	GO:GO:0051087	GO:GO:0051259	GO:GO:0097428	EnsemblPlantsGene:GSBRNA2T00022921001
InterPro:HscB	InterPro:HscB_C_sf	InterPro:HscB_oligo_C	InterPro:IPR001623	InterPro:IPR036386	InterPro:IPR036869
InterPro:J_dom_sf	PFAM:PF07743	PFscan:PS50076	PANTHER:PTHR14021	PANTHER:PTHR14021:SF15	SMART:SM00271
SUPFAM:SSF46565	SUPFAM:SSF47144	TIGRFAMs:TIGR00714	UniParc:UPI0004EDF32E	SEG:seg	:

Description

BnaA10g30380DBnaA10g30380D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IZP1]

Coordinates

chrLK033622:-:42515..43919

Molecular Weight (calculated)

30553.9 Da

IEP (calculated)

7.370

GRAVY (calculated)

-0.726

Length

264 amino acids

Sequence
(BLAST)

001: MNRARKLVAS ISTLSTRRRT YSPSSTFLTI SINSQTHHSS RRESFQPSSS AKPLWLQFSG REFSSGSSEK TSSSVCWNCG FLSEKDAFLF CDSCRSIQPI
101: DDSVDYFQIF GLEKKYELDA GSLEGKYKDW QKKLHPDLVH NKSQKERDYA ADQSAKVTEA YRTLTKRLSR AMYIMKLNGN NVNEEETITD PTLLMEIMEL
201: RETIAEANDS KELDQIRSQV QEKLKQWSDS FVEAFESQRF DEAVKCIQRM TYYERACEEI VKKL

Best Arabidopsis Sequence Match ( AT5G06410.1 )
(BLAST)

001: MKKTKTMVAS ISTLIRRTYP STNQCNSLAT IQSQTQLPRE SLQHHSSAEG RLRFSGRVFC SESGAGCWNC GEKAAFLFCN SCRSIQPVDD SVDYFQIFGL
101: EKKYEIDPGS LEGKYKDWQK KLHPDLVHNK SKKERDYAAE QSAKVTEACR TLTKRLSRAM YIMKLNGVNV NEEETITDPT LLMEIMELRE AISEADDSTS
201: LNQIRSQVQE KLKQWSDSFV EAFESQKFDD AVKCIQRMTY YERACEEILK KL

Arabidopsis Description

DNAJ heat shock N-terminal domain-containing protein [Source:UniProtKB/TrEMBL;Acc:Q8L7K4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.