Factsheet for Zm00001d032301_P008

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d009648_P001
Zm00001d044080_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G78140.1	Zm00001d009648_P001	AT3G18570.1	21798944
AT1G78140.1	Zm00001d044080_P001	AT3G18570.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES14971	Sorghum	plastid	84.75	56.82
Os08t0411200-01	Rice	mitochondrion	58.9	38.83
TraesCS6D01G243900.1	Wheat	plastid	58.9	38.29
TraesCS6B01G298300.1	Wheat	plastid	58.05	38.06
TraesCS6A01G271200.2	Wheat	plastid	56.36	36.94
HORVU2Hr1G078410.1	Barley	plastid	58.05	36.05
HORVU6Hr1G068670.1	Barley	plastid	55.51	33.16
GSMUA_Achr4P01800_001	Banana	mitochondrion	48.31	32.11
VIT_18s0001g05440.t01	Wine grape	mitochondrion	47.46	32.0
CDY26853	Canola	plastid	45.76	31.67
Bra008348.1-P	Field mustard	plastid	45.34	31.38
CDY14625	Canola	plastid	44.92	31.27
KRH53082	Soybean	cytosol, mitochondrion	27.54	30.81
AT1G78140.1	Thale cress	plastid	44.07	29.3
KRH62365	Soybean	plastid	43.22	28.98
CDX88421	Canola	plastid	42.37	28.33
Bra015626.1-P	Field mustard	plastid	41.1	27.87
CDX87473	Canola	golgi, mitochondrion, plastid	41.53	27.53
Zm00001d036738_P002	Maize	plastid	39.83	26.4

Protein Annotations

Gene3D:3.40.50.150	MapMan:35.1	UniProt:A0A1D6KPS5	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168
GO:GO:0009507	GO:GO:0009536	GO:GO:0010287	GO:GO:0016740	GO:GO:0032259	InterPro:Methyltransf_11
ProteinID:ONM04790.1	ProteinID:ONM04792.1	ProteinID:ONM04796.1	PFAM:PF08241	PANTHER:PTHR43591	PANTHER:PTHR43591:SF19
InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	UniParc:UPI000843AB21	EnsemblPlantsGene:Zm00001d032301	EnsemblPlants:Zm00001d032301_P008	EnsemblPlants:Zm00001d032301_T008
SEG:seg	:	:	:	:	:

Description

S-adenosyl-L-methionine-dependent methyltransferases superfamily protein

Coordinates

chr1:-:221117945..221131898

Molecular Weight (calculated)

26080.0 Da

IEP (calculated)

6.254

GRAVY (calculated)

-0.163

Length

236 amino acids

Sequence
(BLAST)

001: MAALGTAITP AAATTAPCCY NRHPRSHITA RRNRVASARR LDLCASSSPA VTAPDIPDEA LVEPLVAPAP ETKLRKLACP ICYYPLASSS DQLDDATSLE
101: CPTCKKCYPN KQDYWDLTVS VGSTEYSESM PVATELFRTP LVSFLYERGW RQNFIWGGFP GLEREFEMAK TYLKPTIGGT IVDASCGSGL FSRLFIKSGL
201: YSLVVALDFS ENMLKQCNQY IKQENISDEY AFGHYV

Best Arabidopsis Sequence Match ( AT1G78140.1 )
(BLAST)

001: MPMTVVSGRF STALLPTCFS LSRLHSVKYA AQRRVVFVSR SAHASSASVS VETNSNSNVD FVIEKKDKNR GEKKILACPI CYNSLAWISQ PNGLIESAAS
101: GIQVQCNTCK RSYSGNETHL DLAVASGSKR YSEPMPLSTE LFRTPLVSFL YERGWRQNFI WGGFPGPEKE FEMAKAYLKP VLGGNIIDAS CGSGMFSRLF
201: TRSDLFSLVI ALDYSENMLR QCYELLNKEE NFPNKEKLVL VRADIARLPF LSGSVDAVHA GAALHCWPSP SSAVAEISRV LRPGGVFVAT TFIYDGPFSF
301: IPFLKNLRQE IMRYSGSHIF LNERELEDIC KACGLVNFTR VRNGPFIMLS ATKPS

Arabidopsis Description

Uncharacterized methyltransferase At1g78140, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LBV4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.