Factsheet for Zm00001d036738_P002

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 5

Predictors

GFP

MS/MS

Papers

plastid: 22065420
plastid: 23198870

msms PMID: 23198870 doi

M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.

msms PMID: 22065420 doi

W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER90112	Sorghum	plastid	85.96	86.93
TraesCS7B01G425600.1	Wheat	cytosol, mitochondrion, nucleus	63.48	85.93
TraesCS7B01G430800.1	Wheat	cytosol, mitochondrion, nucleus, plastid	62.92	85.17
TraesCS7D01G502700.1	Wheat	cytosol, mitochondrion, nucleus	60.96	84.77
Os06t0646000-01	Rice	plastid	78.65	81.16
TraesCS7B01G424400.1	Wheat	mitochondrion	41.57	79.14
TraesCS7A01G513200.1	Wheat	plastid	75.0	76.95
TraesCS7A01G514200.1	Wheat	plastid	73.88	75.79
TraesCS7B01G426900.1	Wheat	plastid	73.31	75.22
TraesCS7B01G429800.1	Wheat	plastid	73.03	74.71
TraesCS7B01G430600.1	Wheat	plastid	71.91	74.42
TraesCS7D01G490800.1	Wheat	plastid	72.47	73.93
TraesCS7D01G398300.2	Wheat	plastid	71.07	70.67
GSMUA_Achr2P05170_001	Banana	plastid	66.29	66.86
HORVU7Hr1G114960.13	Barley	cytosol, plastid	72.19	63.46
VIT_11s0118g00610.t01	Wine grape	plastid	60.11	63.31
VIT_11s0118g00620.t01	Wine grape	plastid	59.83	62.1
Solyc07g007300.2.1	Tomato	plastid	58.43	61.36
PGSC0003DMT400078968	Potato	plastid	58.99	61.22
KRH12868	Soybean	plastid	58.43	61.0
KRH37854	Soybean	plastid	58.15	60.7
PGSC0003DMT400078964	Potato	plastid	58.43	60.29
Solyc07g007310.2.1	Tomato	plastid	57.58	60.12
AT2G41040.1	Thale cress	plastid	55.9	56.53
CDY57579	Canola	plastid	55.34	55.81
Zm00001d032301_P008	Maize	plastid	26.4	39.83
Bra016955.1-P	Field mustard	nucleus	56.18	25.03
CDY06948	Canola	nucleus	56.18	25.0

Protein Annotations

EntrezGene:100193465	Gene3D:3.40.50.150	MapMan:35.1	ProteinID:AQK81802.1	ProteinID:AQK81803.1	UniProt:B4FF45
EMBL:BT035733	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0009507	GO:GO:0009536
GO:GO:0009628	GO:GO:0010287	GO:GO:0016740	GO:GO:0032259	GO:GO:0080167	InterPro:Methyltransf_11
PFAM:PF08241	PANTHER:PTHR43591	PANTHER:PTHR43591:SF19	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	UniParc:UPI00017B6738
EnsemblPlantsGene:Zm00001d036738	EnsemblPlants:Zm00001d036738_P002	EnsemblPlants:Zm00001d036738_T002	SEG:seg	:	:

Description

S-adenosyl-L-methionine-dependent methyltransferases superfamily protein

Coordinates

chr6:+:99510698..99514397

Molecular Weight (calculated)

38965.7 Da

IEP (calculated)

8.596

GRAVY (calculated)

-0.090

Length

356 amino acids

Sequence
(BLAST)

001: MSVAVLRVRA MELLARPAAA ASSSCARPSL QLPAPGTSRP RRPGFPTLRA AAAAAAAIAA EPQSNEQQNI IMETEVFACP VCYEPLMRKG PPGINLPAIY
101: RSGFKCSKCN KSFTSKDIFL DLTVTAGTKE YSEQKPARTE LFRSPLVSFL YERGWRQNFN RSGFPGLDEE FQMAQDYFQP IAGGILLDVS CGSGLFTRKF
201: AKSGTYSAVI ALDFSENMLR QCYEFIKQDD SLLNVNLALV RADISRLPFA SCSVDAIHAG AAIHCWPSPS NAVAEISRVL RPGGVFVGTT FLSSPRNNPF
301: SVEALRPLRQ IVGPVNTSYN YFTEGELEDL CKSCGLVNYS SNVQRSFIMF SGQKPY

Best Arabidopsis Sequence Match ( AT2G41040.1 )
(BLAST)

001: MAMAALTSSS SAITLLNKPF LPNRSSFFSS DSQSPLLRFS ASTSVRSRFP SAAISAVAPK SDINKNETPK IEIEETQVFA CPVCYEPLMR KGPSGINLQA
101: IYRSGFKCGQ CNKTYSSKDE YLDLTVTADL DDYNEVKPIT TELFRSPLVS FLYERGWRQA FKRSGFPGPD EEFRMAEEYF KEAEGGLLVD VSCGSGLFSR
201: KFAQSGKYSG VIALDYSENM LRQCKEFIKN DNTFDNSTNI AVVRADVSRL PFPSGSVDAV HAGAALHCWP SPTNAIAEIC RVLRSGGVFV GTTFLRYSPS
301: TPWIIRPFQS RILQSYNYLM QDEIKDVCTS CGLTDYEDYI QDSFIMFTAR KP

Arabidopsis Description

Uncharacterized methyltransferase At2g41040, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q0WPT7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.