CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH12868	Soybean	plastid	91.5	91.5
VIT_11s0118g00610.t01	Wine grape	plastid	69.5	70.12
VIT_11s0118g00620.t01	Wine grape	plastid	70.38	69.97
TraesCS7B01G424400.1	Wheat	mitochondrion	36.95	67.38
TraesCS7B01G425600.1	Wheat	cytosol, mitochondrion, nucleus	51.91	67.3
TraesCS7B01G430800.1	Wheat	cytosol, mitochondrion, nucleus, plastid	51.32	66.54
TraesCS7D01G502700.1	Wheat	cytosol, mitochondrion, nucleus	49.85	66.41
PGSC0003DMT400078968	Potato	plastid	65.4	65.01
Solyc07g007300.2.1	Tomato	plastid	63.64	64.01
PGSC0003DMT400078964	Potato	plastid	63.64	62.9
Solyc07g007310.2.1	Tomato	plastid	62.46	62.46
AT2G41040.1	Thale cress	plastid	63.34	61.36
CDY57579	Canola	plastid	62.76	60.62
Os06t0646000-01	Rice	plastid	59.53	58.84
EER90112	Sorghum	plastid	60.41	58.52
Zm00001d036738_P002	Maize	plastid	60.7	58.15
TraesCS7B01G430600.1	Wheat	plastid	58.65	58.14
TraesCS7B01G429800.1	Wheat	plastid	58.65	57.47
GSMUA_Achr2P05170_001	Banana	plastid	59.24	57.22
TraesCS7A01G513200.1	Wheat	plastid	58.06	57.06
TraesCS7D01G490800.1	Wheat	plastid	57.48	56.16
TraesCS7A01G514200.1	Wheat	plastid	56.6	55.62
TraesCS7B01G426900.1	Wheat	plastid	56.6	55.62
TraesCS7D01G398300.2	Wheat	plastid	58.06	55.31
KRH53082	Soybean	cytosol, mitochondrion	31.96	51.66
HORVU7Hr1G114960.13	Barley	cytosol, plastid	58.36	49.14
KRH62365	Soybean	plastid	42.82	41.48
Bra016955.1-P	Field mustard	nucleus	64.81	27.66
CDY06948	Canola	nucleus	64.81	27.62

Protein Annotations

EMBL:ACUP02005520	EnsemblPlants:KRH37854	EnsemblPlantsGene:GLYMA_09G093900	Gene3D:3.40.50.150	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0016740	GO:GO:0032259	InterPro:Methyltransf_11
InterPro:SAM-dependent_MTases	PANTHER:PTHR43591	PANTHER:PTHR43591:SF19	PFAM:PF08241	ProteinID:KRH37854	ProteinID:KRH37854.1
SUPFAM:SSF53335	UniParc:UPI0002337FF5	UniProt:I1L2A0	MapMan:35.1	:	:

Description

hypothetical protein

Coordinates

chr9:-:12988754..12993311

Molecular Weight (calculated)

38232.5 Da

IEP (calculated)

8.796

GRAVY (calculated)

-0.289

Length

341 amino acids

Sequence
(BLAST)

001: MATSVLSPPF FHPLHQLQFS KCPRLSSKSH FRPRLLRSIS QRTIRAISAV AAESELGTQQ DHAIEADIFA CPVCYEPLIR KGPSGLNLPA IYRSGFMCKR
101: CKKTYSSKDR YLDLTVTAGL RDYTEIQPAR TELFRSPLVS FLYERGWRQN FRQSGFPGPD EEFKMAQEYF ESAEGGLLVD VSCGSGLFSR KFAKSGTYSG
201: VIALDFSENM LRQCYDFIEK DDTLSTNNIA LVRADVSRLP FSSGSVDAVH AGAALHCWPS PSNAVAEITR TLKNGGVFVG STFLRYSSKT PWFLRPFRER
301: TPQGYGYLTE EEIKDLCTSC GLTNYSSKIQ QAFIMFTAQK P

Best Arabidopsis Sequence Match ( AT2G41040.1 )
(BLAST)

001: MAMAALTSSS SAITLLNKPF LPNRSSFFSS DSQSPLLRFS ASTSVRSRFP SAAISAVAPK SDINKNETPK IEIEETQVFA CPVCYEPLMR KGPSGINLQA
101: IYRSGFKCGQ CNKTYSSKDE YLDLTVTADL DDYNEVKPIT TELFRSPLVS FLYERGWRQA FKRSGFPGPD EEFRMAEEYF KEAEGGLLVD VSCGSGLFSR
201: KFAQSGKYSG VIALDYSENM LRQCKEFIKN DNTFDNSTNI AVVRADVSRL PFPSGSVDAV HAGAALHCWP SPTNAIAEIC RVLRSGGVFV GTTFLRYSPS
301: TPWIIRPFQS RILQSYNYLM QDEIKDVCTS CGLTDYEDYI QDSFIMFTAR KP

Arabidopsis Description

Uncharacterized methyltransferase At2g41040, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q0WPT7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.