Factsheet for PGSC0003DMT400078968

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc07g007300.2.1	Tomato	plastid	93.0	94.1
PGSC0003DMT400078964	Potato	plastid	87.46	86.96
TraesCS7B01G424400.1	Wheat	mitochondrion	39.36	72.19
TraesCS7B01G425600.1	Wheat	cytosol, mitochondrion, nucleus	54.81	71.48
TraesCS7B01G430800.1	Wheat	cytosol, mitochondrion, nucleus, plastid	53.94	70.34
TraesCS7D01G502700.1	Wheat	cytosol, mitochondrion, nucleus	52.19	69.92
VIT_11s0118g00620.t01	Wine grape	plastid	67.93	67.93
VIT_11s0118g00610.t01	Wine grape	plastid	66.47	67.46
KRH12868	Soybean	plastid	65.6	65.98
KRH37854	Soybean	plastid	65.01	65.4
TraesCS7B01G430600.1	Wheat	plastid	63.85	63.66
GSMUA_Achr2P05170_001	Banana	plastid	64.72	62.89
Os06t0646000-01	Rice	plastid	62.97	62.61
TraesCS7B01G429800.1	Wheat	plastid	63.27	62.36
TraesCS7A01G514200.1	Wheat	plastid	61.22	60.52
TraesCS7B01G426900.1	Wheat	plastid	61.22	60.52
AT2G41040.1	Thale cress	plastid	61.81	60.23
TraesCS7D01G490800.1	Wheat	plastid	60.93	59.89
CDY57579	Canola	plastid	61.52	59.77
EER90112	Sorghum	plastid	61.22	59.66
TraesCS7A01G513200.1	Wheat	plastid	60.35	59.65
Zm00001d036738_P002	Maize	plastid	61.22	58.99
TraesCS7D01G398300.2	Wheat	plastid	60.64	58.1
HORVU7Hr1G114960.13	Barley	cytosol, plastid	62.1	52.59
Bra016955.1-P	Field mustard	nucleus	62.39	26.78
CDY06948	Canola	nucleus	62.39	26.75

Protein Annotations

EnsemblPlants:PGSC0003DMT400078968	EnsemblPlantsGene:PGSC0003DMG402030729	EntrezGene:102586203	Gene3D:3.40.50.150	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0016740	GO:GO:0032259	InterPro:Methyltransf_11
InterPro:SAM-dependent_MTases	PANTHER:PTHR43591	PANTHER:PTHR43591:SF19	PFAM:PF08241	PGSC:PGSC0003DMG402030729	RefSeq:XP_006359516.1
SEG:seg	SUPFAM:SSF53335	UniParc:UPI0002963D00	UniProt:M1D114	MapMan:35.1	:

Description

Phosphatidylethanolamine n-methyltransferase [Source:PGSC_GENE;Acc:PGSC0003DMG402030729]

Coordinates

chr7:+:3238318..3242785

Molecular Weight (calculated)

37638.6 Da

IEP (calculated)

8.605

GRAVY (calculated)

-0.131

Length

343 amino acids

Sequence
(BLAST)

001: MAAATASASV SLNHHRSVVP KHHGVSLNSR IGVPTRFSSN GYTSRIRATS AVAVEPELRT PAQDATEAEL FACPICYEPL IRKGPSGFNV PAIYRSGFKC
101: SKCNKSYSSK DIYLDLTVTS GTKQYNEVKP ARSELFRSPI VSFLYERGWR QNFNLSGFPG PDEEFKMAQE YFKVAEGGVL VDVSCGSGLF SRKFAKSGAY
201: SRVIALDFSE NMLRQCYDFI KNDESIISSN LALVRADVSR LPFPSGSIDA VHAGAALHCW PSPSNAIAEI NRILCSGGVF VGTTFLRVNP SAPTIFRALE
301: QSALRTYSYF TQEEIEDLVT SCGLINYTSK VQSSFIMFSA QKQ

Best Arabidopsis Sequence Match ( AT2G41040.1 )
(BLAST)

001: MAMAALTSSS SAITLLNKPF LPNRSSFFSS DSQSPLLRFS ASTSVRSRFP SAAISAVAPK SDINKNETPK IEIEETQVFA CPVCYEPLMR KGPSGINLQA
101: IYRSGFKCGQ CNKTYSSKDE YLDLTVTADL DDYNEVKPIT TELFRSPLVS FLYERGWRQA FKRSGFPGPD EEFRMAEEYF KEAEGGLLVD VSCGSGLFSR
201: KFAQSGKYSG VIALDYSENM LRQCKEFIKN DNTFDNSTNI AVVRADVSRL PFPSGSVDAV HAGAALHCWP SPTNAIAEIC RVLRSGGVFV GTTFLRYSPS
301: TPWIIRPFQS RILQSYNYLM QDEIKDVCTS CGLTDYEDYI QDSFIMFTAR KP

Arabidopsis Description

Uncharacterized methyltransferase At2g41040, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q0WPT7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.