CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY57579	Canola	plastid	39.88	90.37
Bra016955.1-P	Field mustard	nucleus	89.25	89.36
AT2G41040.1	Thale cress	plastid	33.5	76.14
TraesCS7B01G424400.1	Wheat	mitochondrion	15.5	66.31
KRH37854	Soybean	plastid	27.62	64.81
KRH12868	Soybean	plastid	27.5	64.52
TraesCS7B01G425600.1	Wheat	cytosol, mitochondrion, nucleus	21.12	64.26
TraesCS7D01G502700.1	Wheat	cytosol, mitochondrion, nucleus	20.12	62.89
Solyc07g007300.2.1	Tomato	plastid	26.5	62.54
PGSC0003DMT400078968	Potato	plastid	26.75	62.39
TraesCS7B01G430800.1	Wheat	cytosol, mitochondrion, nucleus, plastid	20.5	62.36
VIT_11s0118g00610.t01	Wine grape	plastid	26.25	62.13
Solyc07g007310.2.1	Tomato	plastid	26.25	61.58
VIT_11s0118g00620.t01	Wine grape	plastid	26.38	61.52
PGSC0003DMT400078964	Potato	plastid	26.38	61.16
EER90112	Sorghum	plastid	25.25	57.39
GSMUA_Achr2P05170_001	Banana	plastid	24.88	56.37
Zm00001d036738_P002	Maize	plastid	25.0	56.18
TraesCS7B01G430600.1	Wheat	plastid	24.12	56.1
TraesCS7B01G429800.1	Wheat	plastid	24.12	55.46
Os06t0646000-01	Rice	plastid	23.88	55.36
TraesCS7A01G514200.1	Wheat	plastid	24.0	55.33
TraesCS7A01G513200.1	Wheat	plastid	24.0	55.33
TraesCS7B01G426900.1	Wheat	plastid	23.88	55.04
TraesCS7D01G490800.1	Wheat	plastid	24.0	55.01
TraesCS7D01G398300.2	Wheat	plastid	24.38	54.47
HORVU7Hr1G114960.13	Barley	cytosol, plastid	24.38	48.15
CDY14625	Canola	plastid	18.12	42.77
CDY26853	Canola	plastid	17.75	41.64
CDX88421	Canola	plastid	18.25	41.36
CDX87473	Canola	golgi, mitochondrion, plastid	18.12	40.73

Protein Annotations

Gene3D:2.20.70.10	Gene3D:3.40.30.10	Gene3D:3.40.50.150	MapMan:35.1	GO:A0A078F5J9	EnsemblPlants:CDY06948
ProteinID:CDY06948	ProteinID:CDY06948.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515
GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0016740	GO:GO:0032259	EnsemblPlantsGene:GSBRNA2T00123252001
InterPro:IPR001202	InterPro:Methyltransf_11	PFAM:PF00397	PFAM:PF08241	ScanProsite:PS01159	PFscan:PS50020
PANTHER:PTHR43591	PANTHER:PTHR43591:SF19	InterPro:SAM-dependent_MTases	SMART:SM00456	SUPFAM:SSF51045	SUPFAM:SSF53335
UniParc:UPI0004EF4572	InterPro:WW_dom	InterPro:WW_dom_sf	SEG:seg	:	:

Description

BnaA04g23670D

Coordinates

chrLK031974:-:341976..347116

Molecular Weight (calculated)

87610.2 Da

IEP (calculated)

7.157

GRAVY (calculated)

-0.577

Length

800 amino acids

Sequence
(BLAST)

001: MGEELQQQQN NSSTYGYGSS SLDIESAASN ALLHEQEIET QKIIQGQREA GASVDGESNT DILRQRADPN ALKEHLLKFT AHHRAETASK RGSSVSTCGE
101: GNVDVGNGYG IPGGVAYAGH SEISEKPEPT DYLPEYLKHK LKARGILRDG SGAVTSNAQD ASAGSWNRQT SVPFQTNANT LPLGWVDAKD PATGATYYYN
201: QHTGATQWER PLELPSSAPL PMPPKEEWIE TLDETSGHKY YYNTKTHVSQ WEPPASLKKP SATNTNNTAN GKREIPPSQM PRCSGCGGWG VGLVQSWGYC
301: AHCTRVCNLP EQQYLAYVTN ARNSGQTDPN QRSSSKPPVK KGVGKKRAHA EDDEVDPMDP SSYSDAPRGG WVVGLKGMQP RAADTTATGP LFQQRPYPSP
401: GAVLRRNAET ASSQKKKPGS HFTEITKRGD GKDAKEASLL LVDSLMAMAS LTTSSIALLN KPLLPNRSSS LSSSTSHSRL YRFSSPPSSF RSRFTSASIR
501: AVALEPELNE TPSSDIKETE TVETQVFACP VCYEPLMRKG PSGINLQAIY RSGFKCGQCN KTYSSKDEYL DLTVTAGFDS FNEVKPITTE LFRSPLVSFL
601: YERGWRQNFA RSGFPGPDEE FRMAEEYFKE AEGGVLVDVS CGSGLFSRKF AKSGKYSGVI ALDYSENMLR QCNEFIKKDT TFDSSTNIAV VRADVSRLPF
701: ASGSVDAVHA GAALHCWPSP TNAIAEICRV LRSGGVFVGT TFLRYSPSTP WIIRPFQSRI LQNYNYLMQD EIKDVCTTCG LTDYEDIVQD SFIMFTARKP

Best Arabidopsis Sequence Match ( AT2G41020.1 )
(BLAST)

001: MGEELQYQQN GSSVTSNYGY GSSLAYDQSQ DIESAANTAL LREQEIETQK IIQGQREAGT SVAGDSKHNT DILRDRADPN ALKEHLLKFT ANHRAEAAAK
101: RGGSVSTCGE GNVDVGNGYG IPGGVAYAGH SELSGKPEPT NASNNLPEYL KQKLKARGIL RDGAGAVTSN PEDTSAVSWN RQATLPFQAN ASTLPLGWVD
201: AKDPASGATY YYNQHTGTCQ WERPVELSYA TSSAPPVLSK EEWIETFDEA SGHKYFYNTR THVSQWEPPA SLQKPAATNS NNAVTQSTAN GKGEHPPSQL
301: PRCSGCGGWG VGLVQRWGYC VHCTRVFNLP EKQFLPAHLN HFTNAGDSGQ KDPNQRSSSK PPMKKVIGKK RAHAEDDELD PMDPSSYSDA PRGGWVVGLK
401: GVQPRAADTT ASGPLFQQRP YPSPGAVLRR NAEVASSQKK KPNSQFTEIT KRGDGSDGLG DAD

Arabidopsis Description

Uncharacterized protein At2g41020 [Source:UniProtKB/TrEMBL;Acc:Q67ZZ1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.