Factsheet for VIT_11s0118g00610.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
vacuole 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_11s0118g00620.t01	Wine grape	plastid	83.14	81.92
KRH12868	Soybean	plastid	70.71	70.09
KRH37854	Soybean	plastid	70.12	69.5
TraesCS7B01G424400.1	Wheat	mitochondrion	38.17	68.98
TraesCS7B01G425600.1	Wheat	cytosol, mitochondrion, nucleus	53.25	68.44
TraesCS7B01G430800.1	Wheat	cytosol, mitochondrion, nucleus, plastid	52.96	68.06
TraesCS7D01G502700.1	Wheat	cytosol, mitochondrion, nucleus	51.18	67.58
Solyc07g007300.2.1	Tomato	plastid	67.75	67.55
PGSC0003DMT400078968	Potato	plastid	67.46	66.47
PGSC0003DMT400078964	Potato	plastid	66.27	64.93
Solyc07g007310.2.1	Tomato	plastid	65.09	64.52
GSMUA_Achr2P05170_001	Banana	plastid	65.38	62.61
EER90112	Sorghum	plastid	63.31	60.8
TraesCS7B01G430600.1	Wheat	plastid	61.54	60.47
Zm00001d036738_P002	Maize	plastid	63.31	60.11
TraesCS7A01G513200.1	Wheat	plastid	60.95	59.37
TraesCS7A01G514200.1	Wheat	plastid	60.95	59.37
CDY57579	Canola	plastid	61.24	58.64
Os06t0646000-01	Rice	plastid	59.76	58.55
TraesCS7B01G426900.1	Wheat	plastid	60.06	58.5
TraesCS7B01G429800.1	Wheat	plastid	60.06	58.33
AT2G41040.1	Thale cress	plastid	60.06	57.67
TraesCS7D01G490800.1	Wheat	plastid	59.47	57.59
TraesCS7D01G398300.2	Wheat	plastid	59.76	56.42
HORVU7Hr1G114960.13	Barley	cytosol, plastid	60.35	50.37
VIT_18s0001g05440.t01	Wine grape	mitochondrion	45.27	43.71
Bra016955.1-P	Field mustard	nucleus	62.13	26.28
CDY06948	Canola	nucleus	62.13	26.25

Protein Annotations

EntrezGene:100249966	wikigene:100249966	Gene3D:3.40.50.150	MapMan:35.1	ProteinID:CBI25578	ProteinID:CBI25578.3
UniProt:D7T4Z6	EMBL:FN595515	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152
GO:GO:0008168	GO:GO:0016740	GO:GO:0032259	EntrezGene:LOC100249966	wikigene:LOC100249966	InterPro:Methyltransf_11
PFAM:PF08241	PANTHER:PTHR43591	PANTHER:PTHR43591:SF19	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	TIGR:TC62367
UniParc:UPI0001BE2B53	ArrayExpress:VIT_11s0118g00610	EnsemblPlantsGene:VIT_11s0118g00610	EnsemblPlants:VIT_11s0118g00610.t01	unigene:Vvi.12362	RefSeq:XP_002268200
RefSeq:XP_002268200.1	:	:	:	:	:

Description

No Description!

Coordinates

chr11:-:6382565..6387393

Molecular Weight (calculated)

37656.0 Da

IEP (calculated)

8.604

GRAVY (calculated)

-0.134

Length

338 amino acids

Sequence
(BLAST)

001: MAASFLHQPL FPKYPFLLHK SQFISRPQIS SLPFPSRFRA SSAVALEPES SPQLNNDMDF DLFSCPVCYE PLIRKGPPGL NLPAIYRSGF KCKTCNKSYS
101: SKDMYLDLTI TAGSKAYNEA QPVRTELFRS PLVSFLYERG WRQNFNLRGF PGPDEEFKMA QEYFKPAAGG LLVDVSCGSG LFSRKFAESG TYSGVVALDF
201: SENMLHQCYD FIKKDNPSLT TNLALVRADI SRLPFSSGSV DAVHAGAALH CWPSPSNAVA EITRILRSGG IFVGTTFLRP IYTNSSIPAI LRPFRQSILQ
301: TSNYLTEKEI EDLCRSCALI NYTSTIQQSF IMFSAQKA

Best Arabidopsis Sequence Match ( AT2G41040.1 )
(BLAST)

001: MAMAALTSSS SAITLLNKPF LPNRSSFFSS DSQSPLLRFS ASTSVRSRFP SAAISAVAPK SDINKNETPK IEIEETQVFA CPVCYEPLMR KGPSGINLQA
101: IYRSGFKCGQ CNKTYSSKDE YLDLTVTADL DDYNEVKPIT TELFRSPLVS FLYERGWRQA FKRSGFPGPD EEFRMAEEYF KEAEGGLLVD VSCGSGLFSR
201: KFAQSGKYSG VIALDYSENM LRQCKEFIKN DNTFDNSTNI AVVRADVSRL PFPSGSVDAV HAGAALHCWP SPTNAIAEIC RVLRSGGVFV GTTFLRYSPS
301: TPWIIRPFQS RILQSYNYLM QDEIKDVCTS CGLTDYEDYI QDSFIMFTAR KP

Arabidopsis Description

Uncharacterized methyltransferase At2g41040, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q0WPT7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.