Factsheet for PGSC0003DMT400078964

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc07g007310.2.1	Tomato	plastid	92.75	93.84
PGSC0003DMT400078968	Potato	plastid	86.96	87.46
TraesCS7B01G424400.1	Wheat	mitochondrion	38.26	70.59
TraesCS7B01G425600.1	Wheat	cytosol, mitochondrion, nucleus	53.04	69.58
TraesCS7B01G430800.1	Wheat	cytosol, mitochondrion, nucleus, plastid	51.88	68.06
TraesCS7D01G502700.1	Wheat	cytosol, mitochondrion, nucleus	50.14	67.58
VIT_11s0118g00620.t01	Wine grape	plastid	66.67	67.06
VIT_11s0118g00610.t01	Wine grape	plastid	64.93	66.27
KRH37854	Soybean	plastid	62.9	63.64
KRH12868	Soybean	plastid	62.32	63.05
TraesCS7B01G430600.1	Wheat	plastid	61.16	61.34
Os06t0646000-01	Rice	plastid	61.16	61.16
GSMUA_Achr2P05170_001	Banana	plastid	62.03	60.62
TraesCS7B01G429800.1	Wheat	plastid	60.58	60.06
EER90112	Sorghum	plastid	60.0	58.81
CDY57579	Canola	plastid	60.0	58.64
Zm00001d036738_P002	Maize	plastid	60.29	58.43
AT2G41040.1	Thale cress	plastid	59.13	57.95
TraesCS7A01G514200.1	Wheat	plastid	58.26	57.93
TraesCS7B01G426900.1	Wheat	plastid	58.26	57.93
TraesCS7A01G513200.1	Wheat	plastid	58.26	57.93
TraesCS7D01G490800.1	Wheat	plastid	57.39	56.73
TraesCS7D01G398300.2	Wheat	plastid	58.84	56.7
HORVU7Hr1G114960.13	Barley	cytosol, plastid	58.84	50.12
Bra016955.1-P	Field mustard	nucleus	61.16	26.41
CDY06948	Canola	nucleus	61.16	26.38

Protein Annotations

EnsemblPlants:PGSC0003DMT400078964	EnsemblPlantsGene:PGSC0003DMG401030729	EntrezGene:102586534	Gene3D:3.40.50.150	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0016740	GO:GO:0032259	InterPro:Methyltransf_11
InterPro:SAM-dependent_MTases	PANTHER:PTHR43591	PANTHER:PTHR43591:SF19	PFAM:PF08241	PGSC:PGSC0003DMG401030729	RefSeq:XP_006359517.1
SUPFAM:SSF53335	UniParc:UPI000295041D	UniProt:M1D113	MapMan:35.1	:	:

Description

S-adenosylmethionine-dependent methyltransferase [Source:PGSC_GENE;Acc:PGSC0003DMG401030729]

Coordinates

chr7:+:3244818..3250145

Molecular Weight (calculated)

38040.4 Da

IEP (calculated)

9.586

GRAVY (calculated)

-0.122

Length

345 amino acids

Sequence
(BLAST)

001: MATATFAVSP SLSLNHHRSL VPIQRGVSLN SKIRVPTRFS SNGYTSRIRA TSAVAVEPEL RTPAQVVTEA ELFACPICYE PLIRKGPSGF NVPAIYRSGF
101: KCRKCNKSYS SKNIYLDLTV TSGTKEYNES KPTGTELFRS PVVSFLYERG WRQSFNRGGF PGPDEEFKMA QDYFKVAEGG VLVDVSCGSG LFSRKFAKSG
201: VYSRVIALDF SENMLRQCYD FIKTDESILS SNLALVRADV SRLPFFSGSV DAVHAGAALH CWPSPSNAIA EINRILRSGG IFVGTTFLRV NPSAPPILRA
301: LQQSATRTYS FFTQEEIEDL VTTCGLINYT SKVQGGFIMF SAQKR

Best Arabidopsis Sequence Match ( AT2G41040.1 )
(BLAST)

001: MAMAALTSSS SAITLLNKPF LPNRSSFFSS DSQSPLLRFS ASTSVRSRFP SAAISAVAPK SDINKNETPK IEIEETQVFA CPVCYEPLMR KGPSGINLQA
101: IYRSGFKCGQ CNKTYSSKDE YLDLTVTADL DDYNEVKPIT TELFRSPLVS FLYERGWRQA FKRSGFPGPD EEFRMAEEYF KEAEGGLLVD VSCGSGLFSR
201: KFAQSGKYSG VIALDYSENM LRQCKEFIKN DNTFDNSTNI AVVRADVSRL PFPSGSVDAV HAGAALHCWP SPTNAIAEIC RVLRSGGVFV GTTFLRYSPS
301: TPWIIRPFQS RILQSYNYLM QDEIKDVCTS CGLTDYEDYI QDSFIMFTAR KP

Arabidopsis Description

Uncharacterized methyltransferase At2g41040, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q0WPT7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.