CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT2G41040.1	Thale cress	plastid	79.04	79.26
TraesCS7B01G424400.1	Wheat	mitochondrion	34.84	65.78
KRH12868	Soybean	plastid	61.76	63.93
TraesCS7B01G425600.1	Wheat	cytosol, mitochondrion, nucleus	47.59	63.88
KRH37854	Soybean	plastid	60.62	62.76
TraesCS7B01G430800.1	Wheat	cytosol, mitochondrion, nucleus, plastid	46.74	62.74
TraesCS7D01G502700.1	Wheat	cytosol, mitochondrion, nucleus	45.33	62.5
Solyc07g007300.2.1	Tomato	plastid	59.49	61.95
PGSC0003DMT400078968	Potato	plastid	59.77	61.52
VIT_11s0118g00610.t01	Wine grape	plastid	58.64	61.24
Solyc07g007310.2.1	Tomato	plastid	58.36	60.41
VIT_11s0118g00620.t01	Wine grape	plastid	58.64	60.35
PGSC0003DMT400078964	Potato	plastid	58.64	60.0
EER90112	Sorghum	plastid	55.52	55.68
Zm00001d036738_P002	Maize	plastid	55.81	55.34
Os06t0646000-01	Rice	plastid	53.82	55.07
GSMUA_Achr2P05170_001	Banana	plastid	54.96	54.96
TraesCS7A01G513200.1	Wheat	plastid	53.82	54.76
TraesCS7B01G429800.1	Wheat	plastid	53.82	54.6
TraesCS7B01G430600.1	Wheat	plastid	52.97	54.36
TraesCS7A01G514200.1	Wheat	plastid	53.26	54.18
TraesCS7B01G426900.1	Wheat	plastid	53.26	54.18
TraesCS7D01G490800.1	Wheat	plastid	53.26	53.87
TraesCS7D01G398300.2	Wheat	plastid	53.54	52.79
HORVU7Hr1G114960.13	Barley	cytosol, plastid	53.26	46.42
CDY14625	Canola	plastid	41.08	42.77
CDY26853	Canola	plastid	40.23	41.64
CDX88421	Canola	plastid	41.36	41.36
CDX87473	Canola	golgi, mitochondrion, plastid	40.51	40.17
CDY06948	Canola	nucleus	90.37	39.88

Protein Annotations

EnsemblPlants:CDY57579	EnsemblPlantsGene:GSBRNA2T00022384001	Gene3D:3.40.50.150	GO:A0A078J4R2	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0016740	GO:GO:0032259	InterPro:Methyltransf_11
InterPro:SAM-dependent_MTases	PANTHER:PTHR43591	PANTHER:PTHR43591:SF19	PFAM:PF08241	ProteinID:CDY57579	ProteinID:CDY57579.1
SEG:seg	SUPFAM:SSF53335	UniParc:UPI0004EDF222	UniProt:A0A078J4R2	MapMan:35.1	:

Description

BnaC04g56820DBnaC04g56820D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J4R2]

Coordinates

chrLK033586:+:26168..28095

Molecular Weight (calculated)

39218.4 Da

IEP (calculated)

7.195

GRAVY (calculated)

-0.216

Length

353 amino acids

Sequence
(BLAST)

001: MAMASLTTSS SIALLNKSLL PNRSSSLSSS TSHSRLYRFS SSVRSRFTSA SIRAVALEPE LNETPSSDIK ETETVETQVF ACPVCYEPLM RKGPSGINLQ
101: AIYRSGFKCG QCNKTYSSKD EYLDLTVTAG FDSFNEVKPI TTELFRSPLV SFLYERGWRQ NFARSGFPGP DEEFRMAEEY FKEAEGGVLV DVSCGSGLFS
201: RKFAKSGKYS GVIALDYSEN MLRQCNEFIK KDATFDSSTN IAVVRADVSR LPFPSGSVDA VHAGAALHCW PSPTNAIAEI CRVLRSGGVF VGTTFLRYSP
301: STPWIIRPFQ SRILQNYNYL MQDEIKDVCT TCGLTDYEDI VQDSFIMFTA RKP

Best Arabidopsis Sequence Match ( AT2G41040.1 )
(BLAST)

001: MAMAALTSSS SAITLLNKPF LPNRSSFFSS DSQSPLLRFS ASTSVRSRFP SAAISAVAPK SDINKNETPK IEIEETQVFA CPVCYEPLMR KGPSGINLQA
101: IYRSGFKCGQ CNKTYSSKDE YLDLTVTADL DDYNEVKPIT TELFRSPLVS FLYERGWRQA FKRSGFPGPD EEFRMAEEYF KEAEGGLLVD VSCGSGLFSR
201: KFAQSGKYSG VIALDYSENM LRQCKEFIKN DNTFDNSTNI AVVRADVSRL PFPSGSVDAV HAGAALHCWP SPTNAIAEIC RVLRSGGVFV GTTFLRYSPS
301: TPWIIRPFQS RILQSYNYLM QDEIKDVCTS CGLTDYEDYI QDSFIMFTAR KP

Arabidopsis Description

Uncharacterized methyltransferase At2g41040, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q0WPT7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.