CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G425600.1	Wheat	cytosol, mitochondrion, nucleus	64.77	86.69
TraesCS7D01G502700.1	Wheat	cytosol, mitochondrion, nucleus	62.78	86.33
Zm00001d036738_P002	Maize	plastid	86.93	85.96
TraesCS7B01G430800.1	Wheat	cytosol, mitochondrion, nucleus, plastid	64.2	85.93
Os06t0646000-01	Rice	plastid	79.55	81.16
TraesCS7B01G424400.1	Wheat	mitochondrion	42.33	79.68
TraesCS7A01G513200.1	Wheat	plastid	75.85	76.95
TraesCS7D01G490800.1	Wheat	plastid	74.72	75.36
TraesCS7B01G430600.1	Wheat	plastid	73.3	75.0
TraesCS7B01G429800.1	Wheat	plastid	74.15	75.0
TraesCS7A01G514200.1	Wheat	plastid	73.86	74.93
TraesCS7B01G426900.1	Wheat	plastid	73.58	74.64
TraesCS7D01G398300.2	Wheat	plastid	73.3	72.07
GSMUA_Achr2P05170_001	Banana	plastid	68.47	68.27
HORVU7Hr1G114960.13	Barley	cytosol, plastid	73.86	64.2
VIT_11s0118g00620.t01	Wine grape	plastid	62.5	64.14
VIT_11s0118g00610.t01	Wine grape	plastid	60.8	63.31
Solyc07g007300.2.1	Tomato	plastid	59.66	61.95
KRH12868	Soybean	plastid	59.66	61.58
PGSC0003DMT400078968	Potato	plastid	59.66	61.22
KRH37854	Soybean	plastid	58.52	60.41
Solyc07g007310.2.1	Tomato	plastid	58.24	60.12
PGSC0003DMT400078964	Potato	plastid	58.81	60.0
CDY57579	Canola	plastid	55.68	55.52
AT2G41040.1	Thale cress	plastid	55.4	55.4
EES14971	Sorghum	plastid	48.3	48.3
Bra016955.1-P	Field mustard	nucleus	57.39	25.28
CDY06948	Canola	nucleus	57.39	25.25

Protein Annotations

Gene3D:3.40.50.150	MapMan:35.1	EntrezGene:8069328	UniProt:C5Z6R2	EnsemblPlants:EER90112	ProteinID:EER90112
ProteinID:EER90112.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0009507	GO:GO:0009536
GO:GO:0009628	GO:GO:0010287	GO:GO:0016740	GO:GO:0032259	GO:GO:0080167	InterPro:Methyltransf_11
PFAM:PF08241	PANTHER:PTHR43591	PANTHER:PTHR43591:SF19	InterPro:SAM-dependent_MTases	EnsemblPlantsGene:SORBI_3010G207100	SUPFAM:SSF53335
unigene:Sbi.2277	UniParc:UPI0001A89A98	RefSeq:XP_002438745.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr10:-:54990387..54993938

Molecular Weight (calculated)

38600.2 Da

IEP (calculated)

8.671

GRAVY (calculated)

-0.171

Length

352 amino acids

Sequence
(BLAST)

001: MELQLLVRPA ATAPSSARAR PSLRLPAPAA GPSRPRRPGF PTLRAAAAAA AAIAAEPETK EQQQNSIMET EVFACPVCYE PLMRKGPPGI NLPAIYRSGF
101: KCSKCNKSFT SKDIFLDLTV TAGTKEYSEQ KPARTELFRS PLVSFLYERG WRQNFNRSGF PGLDEEFEMA QDYFQPVAGG ILLDVSCGSG LFTRKFAKSG
201: TYSAVIALDF SENMLRQCYE FIKQDDTLLN ANLALVRADI SRLPFASCSV DAIHAGAAIH CWPSPSNAVA EISRVLRPGG VFVGTTFLSS PRNNPFSVEA
301: LRPLRQIVGP VNTSYNYFTE GELEDLCKSC GLVNYSSKVQ RSFIMFSGQK PY

Best Arabidopsis Sequence Match ( AT2G41040.1 )
(BLAST)

001: MAMAALTSSS SAITLLNKPF LPNRSSFFSS DSQSPLLRFS ASTSVRSRFP SAAISAVAPK SDINKNETPK IEIEETQVFA CPVCYEPLMR KGPSGINLQA
101: IYRSGFKCGQ CNKTYSSKDE YLDLTVTADL DDYNEVKPIT TELFRSPLVS FLYERGWRQA FKRSGFPGPD EEFRMAEEYF KEAEGGLLVD VSCGSGLFSR
201: KFAQSGKYSG VIALDYSENM LRQCKEFIKN DNTFDNSTNI AVVRADVSRL PFPSGSVDAV HAGAALHCWP SPTNAIAEIC RVLRSGGVFV GTTFLRYSPS
301: TPWIIRPFQS RILQSYNYLM QDEIKDVCTS CGLTDYEDYI QDSFIMFTAR KP

Arabidopsis Description

Uncharacterized methyltransferase At2g41040, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q0WPT7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.