Factsheet for VIT_11s0118g00620.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_11s0118g00610.t01	Wine grape	plastid	81.92	83.14
TraesCS7B01G425600.1	Wheat	cytosol, mitochondrion, nucleus	54.81	71.48
KRH12868	Soybean	plastid	70.26	70.67
KRH37854	Soybean	plastid	69.97	70.38
TraesCS7B01G430800.1	Wheat	cytosol, mitochondrion, nucleus, plastid	53.94	70.34
TraesCS7B01G424400.1	Wheat	mitochondrion	38.19	70.05
TraesCS7D01G502700.1	Wheat	cytosol, mitochondrion, nucleus	52.19	69.92
Solyc07g007300.2.1	Tomato	plastid	68.22	69.03
PGSC0003DMT400078968	Potato	plastid	67.93	67.93
PGSC0003DMT400078964	Potato	plastid	67.06	66.67
Solyc07g007310.2.1	Tomato	plastid	65.89	66.28
TraesCS7B01G430600.1	Wheat	plastid	63.27	63.08
EER90112	Sorghum	plastid	64.14	62.5
GSMUA_Achr2P05170_001	Banana	plastid	64.14	62.32
TraesCS7A01G513200.1	Wheat	plastid	62.39	61.67
TraesCS7B01G429800.1	Wheat	plastid	62.39	61.49
TraesCS7A01G514200.1	Wheat	plastid	62.1	61.38
TraesCS7B01G426900.1	Wheat	plastid	61.52	60.81
TraesCS7D01G490800.1	Wheat	plastid	61.52	60.46
Zm00001d036738_P002	Maize	plastid	62.1	59.83
Os06t0646000-01	Rice	plastid	60.06	59.71
AT2G41040.1	Thale cress	plastid	60.64	59.09
CDY57579	Canola	plastid	60.35	58.64
TraesCS7D01G398300.2	Wheat	plastid	60.93	58.38
HORVU7Hr1G114960.13	Barley	cytosol, plastid	61.81	52.35
VIT_18s0001g05440.t01	Wine grape	mitochondrion	46.36	45.43
Bra016955.1-P	Field mustard	nucleus	61.52	26.41
CDY06948	Canola	nucleus	61.52	26.38

Protein Annotations

EntrezGene:100267134	wikigene:100267134	Gene3D:3.40.50.150	MapMan:35.1	ProteinID:CBI25579	ProteinID:CBI25579.3
UniProt:D7T4Z7	EMBL:FN595515	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152
GO:GO:0008168	GO:GO:0016740	GO:GO:0032259	EntrezGene:LOC100267134	wikigene:LOC100267134	InterPro:Methyltransf_11
PFAM:PF08241	PANTHER:PTHR43591	PANTHER:PTHR43591:SF19	InterPro:SAM-dependent_MTases	SUPFAM:SSF53335	TIGR:TC66114
UniParc:UPI00015CCB20	ArrayExpress:VIT_11s0118g00620	EnsemblPlantsGene:VIT_11s0118g00620	EnsemblPlants:VIT_11s0118g00620.t01	unigene:Vvi.2589	RefSeq:XP_002268107
RefSeq:XP_002268107.1	:	:	:	:	:

Description

No Description!

Coordinates

chr11:-:6387787..6395105

Molecular Weight (calculated)

38328.5 Da

IEP (calculated)

8.907

GRAVY (calculated)

-0.268

Length

343 amino acids

Sequence
(BLAST)

001: MATASSSLHQ PIFPQYPSLS RSSRFHPPLR LSSLRFPSRI RASSAVALEP ESSTQLNNGL EFDLFSCPVC YEPLIRKGPP GLNLPAIYRS GFKCRSCNKS
101: YSSKDMYLDL TITAGSKDYN ELQPNRTELF RSPLVSFLYE RGWRQNFNQS GFPGRDEEFK MAQEYFEPVI GGLLVDVSCG SGLFSRKFAE SGTYSGVVAL
201: DFSENMLRQC YDFIKKENPA LATTNLALVR ADVSRLPFST GSVDAVHAGA ALHCWPSPSN AVAEITRILR SGGIFVGTTF LRPSFGNSSI TSILRPFRQW
301: ERSLQNYNNL TEKEIEDLCT SCGLINYRSK VQRSFIMFSA QKA

Best Arabidopsis Sequence Match ( AT2G41040.1 )
(BLAST)

001: MAMAALTSSS SAITLLNKPF LPNRSSFFSS DSQSPLLRFS ASTSVRSRFP SAAISAVAPK SDINKNETPK IEIEETQVFA CPVCYEPLMR KGPSGINLQA
101: IYRSGFKCGQ CNKTYSSKDE YLDLTVTADL DDYNEVKPIT TELFRSPLVS FLYERGWRQA FKRSGFPGPD EEFRMAEEYF KEAEGGLLVD VSCGSGLFSR
201: KFAQSGKYSG VIALDYSENM LRQCKEFIKN DNTFDNSTNI AVVRADVSRL PFPSGSVDAV HAGAALHCWP SPTNAIAEIC RVLRSGGVFV GTTFLRYSPS
301: TPWIIRPFQS RILQSYNYLM QDEIKDVCTS CGLTDYEDYI QDSFIMFTAR KP

Arabidopsis Description

Uncharacterized methyltransferase At2g41040, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q0WPT7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.