Factsheet for Bra016955.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY06948	Canola	nucleus	89.36	89.25
AT2G41040.1	Thale cress	plastid	33.54	76.14
TraesCS7B01G424400.1	Wheat	mitochondrion	15.52	66.31
KRH37854	Soybean	plastid	27.66	64.81
KRH12868	Soybean	plastid	27.53	64.52
TraesCS7B01G425600.1	Wheat	cytosol, mitochondrion, nucleus	21.15	64.26
TraesCS7D01G502700.1	Wheat	cytosol, mitochondrion, nucleus	20.15	62.89
Solyc07g007300.2.1	Tomato	plastid	26.53	62.54
PGSC0003DMT400078968	Potato	plastid	26.78	62.39
TraesCS7B01G430800.1	Wheat	cytosol, mitochondrion, nucleus, plastid	20.53	62.36
VIT_11s0118g00610.t01	Wine grape	plastid	26.28	62.13
Solyc07g007310.2.1	Tomato	plastid	26.28	61.58
VIT_11s0118g00620.t01	Wine grape	plastid	26.41	61.52
PGSC0003DMT400078964	Potato	plastid	26.41	61.16
EER90112	Sorghum	plastid	25.28	57.39
Zm00001d036738_P002	Maize	plastid	25.03	56.18
TraesCS7B01G430600.1	Wheat	plastid	24.16	56.1
GSMUA_Achr2P05170_001	Banana	plastid	24.78	56.09
TraesCS7B01G429800.1	Wheat	plastid	24.16	55.46
Os06t0646000-01	Rice	plastid	23.9	55.36
TraesCS7A01G513200.1	Wheat	plastid	24.03	55.33
TraesCS7A01G514200.1	Wheat	plastid	24.03	55.33
TraesCS7B01G426900.1	Wheat	plastid	23.9	55.04
TraesCS7D01G490800.1	Wheat	plastid	24.03	55.01
TraesCS7D01G398300.2	Wheat	plastid	24.41	54.47
HORVU7Hr1G114960.13	Barley	cytosol, plastid	24.41	48.15
Bra015626.1-P	Field mustard	plastid	18.4	42.24
Bra008348.1-P	Field mustard	plastid	17.65	41.35

Protein Annotations

Gene3D:2.20.70.10	Gene3D:3.40.30.10	Gene3D:3.40.50.150	MapMan:35.1	EnsemblPlantsGene:Bra016955	EnsemblPlants:Bra016955.1
EnsemblPlants:Bra016955.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0008150
GO:GO:0008152	GO:GO:0008168	GO:GO:0016740	GO:GO:0032259	InterPro:IPR001202	UniProt:M4DKC6
InterPro:Methyltransf_11	PFAM:PF00397	PFAM:PF08241	ScanProsite:PS01159	PFscan:PS50020	PANTHER:PTHR43591
PANTHER:PTHR43591:SF19	InterPro:SAM-dependent_MTases	SMART:SM00456	SUPFAM:SSF51045	SUPFAM:SSF53335	UniParc:UPI00025452EC
InterPro:WW_dom	InterPro:WW_dom_sf	SEG:seg	:	:	:

Description

AT2G41020 (E=1e-190) | WW domain-containing protein

Coordinates

chrA04:+:17406920..17411889

Molecular Weight (calculated)

87625.3 Da

IEP (calculated)

7.363

GRAVY (calculated)

-0.582

Length

799 amino acids

Sequence
(BLAST)

001: MGEELQQHHN NSSTYGYGSS SLDIESAASN ALLHEQEIET QKIIQGQREA GASVDGESNT DILRQRADPN ALKEHLLKFT AHHRAETASK RGSVSTCGEG
101: NVDVGNGYGI PGGVAYAGHS EISEKPEPTD YLPEYLKHKL KARGILRDGS GAVTSNAHDA SAGSWNRQTS VPFQTNANTL PLGWVDAKDP ATGATYYYNQ
201: HTGATQWERP LELPSSAPLP MPPKEEWIET LDETSGHKYY YNTKTHVSQW EPPASLKKPS ATNTNNTANG KRELPPSQMP RCSGCGGWGV GLVQSWGYCA
301: HCTRVCNLPE QQYLAYVTNA RNSGQTDPNQ RSSSKPPVKK GVGKKRAHAE DDEVDPMDPS SYSDAPRGGW VVGLKGMQPR AADTTATGPL FQQRPYPSPG
401: AVLRRNAETA SSQKKKPGSH FTEITKRGDG KDAKEASLLL VDSLMAMASL TTSSIALLNK PFLPNRSSSL SSSTLHSRLY RFSSPPSSFR SRFTSASIRA
501: VALEPELNET PSSDKKETET VETQVFACPV CYEPLMRKGP SGINLQAIYR SGFKCGQCNK TYSSKDEYLD LTVTAGFDSF NEVKPITTEL FRSPLVSFLY
601: ERGWRQNFAR SGFPGPDEEF RMAEEYFKEA EGGVLVDVSC GSGLFSRKFA KSGKYSGVIA LDYSENMLRQ CNEFIKKDTT FDSSTNIAVV RADVSRLPFA
701: SGSVDAVHAG AALHCWPSPT NAIAEICRVL RSGGVFVGTT FLRYSPSTPW IIRPFQSRIL QNYNYLMQDE IKDVCTTCGL TDYEDIVQDS FIMFTARKP

Best Arabidopsis Sequence Match ( AT2G41020.1 )
(BLAST)

001: MGEELQYQQN GSSVTSNYGY GSSLAYDQSQ DIESAANTAL LREQEIETQK IIQGQREAGT SVAGDSKHNT DILRDRADPN ALKEHLLKFT ANHRAEAAAK
101: RGGSVSTCGE GNVDVGNGYG IPGGVAYAGH SELSGKPEPT NASNNLPEYL KQKLKARGIL RDGAGAVTSN PEDTSAVSWN RQATLPFQAN ASTLPLGWVD
201: AKDPASGATY YYNQHTGTCQ WERPVELSYA TSSAPPVLSK EEWIETFDEA SGHKYFYNTR THVSQWEPPA SLQKPAATNS NNAVTQSTAN GKGEHPPSQL
301: PRCSGCGGWG VGLVQRWGYC VHCTRVFNLP EKQFLPAHLN HFTNAGDSGQ KDPNQRSSSK PPMKKVIGKK RAHAEDDELD PMDPSSYSDA PRGGWVVGLK
401: GVQPRAADTT ASGPLFQQRP YPSPGAVLRR NAEVASSQKK KPNSQFTEIT KRGDGSDGLG DAD

Arabidopsis Description

Uncharacterized protein At2g41020 [Source:UniProtKB/TrEMBL;Acc:Q67ZZ1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.