Factsheet for Bra015626.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	plastid
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra001711.1-P
Bra022333.1-P
Bra037577.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G78140.1	Bra001711.1-P	AT3G18570.1	21798944
AT1G78140.1	Bra022333.1-P	AT3G18570.1	21798944
AT1G78140.1	Bra037577.1-P	AT3G18570.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX87473	Canola	golgi, mitochondrion, plastid	97.99	95.79
Bra008348.1-P	Field mustard	plastid	72.99	74.49
KRH53082	Soybean	cytosol, mitochondrion	43.39	71.56
AT1G78140.1	Thale cress	plastid	72.41	70.99
VIT_18s0001g05440.t01	Wine grape	mitochondrion	56.03	55.71
KRH62365	Soybean	plastid	54.6	53.98
GSMUA_Achr4P01800_001	Banana	mitochondrion	54.31	53.24
TraesCS6B01G298300.1	Wheat	plastid	53.16	51.39
TraesCS6A01G271200.2	Wheat	plastid	52.59	50.83
Os08t0411200-01	Rice	mitochondrion	52.01	50.56
TraesCS6D01G243900.1	Wheat	plastid	52.01	49.86
EES14971	Sorghum	plastid	48.85	48.3
HORVU2Hr1G078410.1	Barley	plastid	52.3	47.89
HORVU6Hr1G068670.1	Barley	plastid	51.44	45.32
Zm00001d032301_P008	Maize	plastid	27.87	41.1
Bra016955.1-P	Field mustard	nucleus	42.24	18.4

Protein Annotations

EnsemblPlants:Bra015626.1	EnsemblPlants:Bra015626.1-P	EnsemblPlantsGene:Bra015626	Gene3D:3.40.50.150	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0008168	GO:GO:0016740	GO:GO:0032259	InterPro:Methyltransf_11
InterPro:SAM-dependent_MTases	PANTHER:PTHR43591	PANTHER:PTHR43591:SF19	PFAM:PF08241	SUPFAM:SSF53335	UniParc:UPI0002541B85
UniProt:M4DGK1	MapMan:35.1	:	:	:	:

Description

AT1G78140 (E=2e-144) | methyltransferase-related

Coordinates

chrA07:-:21699520..21701560

Molecular Weight (calculated)

38701.0 Da

IEP (calculated)

8.582

GRAVY (calculated)

0.063

Length

348 amino acids

Sequence
(BLAST)

001: MPRTIVSGRL SPAALPIGLS VSRLLSVKYA AQRLPVSVLI SARVCSFAVE TKSSVDYVVE KEKKKILACP ICYNSLAALI SQPHESAEYP ASGTHLQCKY
101: CKKSYSANET HLDLTVASGT KQYTEPLPLS IELYRNPLVS FLYERGWRQN FMWGGFPGPE KEFEMASEYL KHVLGGNIID ASCGSGLFSR LFAKSEHFAM
201: VYALDYSENM LRQCYEFLKQ EANLIDKKIV VLARADIARL PFLSGSVDAV HAGAALHCWP SPSSAVAEIS RVLRPGGVFV ATTFIYDGLF RFVPFLKELR
301: QEIMRYSGSH MFLSERELED LCKSCGLVGF TCVRNGLFIM LSATKPTR

Best Arabidopsis Sequence Match ( AT1G78140.1 )
(BLAST)

001: MPMTVVSGRF STALLPTCFS LSRLHSVKYA AQRRVVFVSR SAHASSASVS VETNSNSNVD FVIEKKDKNR GEKKILACPI CYNSLAWISQ PNGLIESAAS
101: GIQVQCNTCK RSYSGNETHL DLAVASGSKR YSEPMPLSTE LFRTPLVSFL YERGWRQNFI WGGFPGPEKE FEMAKAYLKP VLGGNIIDAS CGSGMFSRLF
201: TRSDLFSLVI ALDYSENMLR QCYELLNKEE NFPNKEKLVL VRADIARLPF LSGSVDAVHA GAALHCWPSP SSAVAEISRV LRPGGVFVAT TFIYDGPFSF
301: IPFLKNLRQE IMRYSGSHIF LNERELEDIC KACGLVNFTR VRNGPFIMLS ATKPS

Arabidopsis Description

Uncharacterized methyltransferase At1g78140, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LBV4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.